RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 COL18A1P39060 1754 aa10.93□□□□□ -0.66
RNF43-207ENST00000583753 WDR46O15213 610 aaKnown RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 B4GALT5O43286 388 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 TCEA3O75764 348 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 SLC4A1P02730 911 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 CSH1P0DML2 217 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 CSH2P0DML3 217 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 RARBP10826 455 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 SNRPFP62306 86 aaKnown RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 SLC12A1Q13621 1099 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 GOLGA7BQ2TAP0 167 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 PPP1R2P3Q6NXS1 205 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 BBS12Q6ZW61 710 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 DHDDSQ86SQ9 333 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 C10orf107Q8IVU9 208 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 MPP5Q8N3R9 675 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 SNX31Q8N9S9 440 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 PIWIL2Q8TC59 973 aaKnown RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 FAM136AQ96C01 138 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 ERLEC1Q96DZ1 483 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 KIF12Q96FN5 646 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 VCPIP1Q96JH7 1222 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 EPAS1Q99814 870 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 CCT7Q99832 543 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 PPCSQ9HAB8 311 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 ITM2AO43736 263 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 GNL1P36915 607 aaPredicted RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 PGGT1BP53609 377 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 PTPN11Q06124 597 aaPredicted RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 ITKQ08881 620 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 DLG1Q12959 904 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 R3HDM1Q15032 1099 aaKnown RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 VPS72Q15906 364 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 LRRC8EQ6NSJ5 796 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 KCNT2Q6UVM3 1135 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 C12orf56Q8IXR9 622 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 SHKBP1Q8TBC3 707 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 SLC44A1Q8WWI5 657 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 CAB39LQ9H9S4 337 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 CYP4F12Q9HCS2 524 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 TP73O15350 636 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 TM7SF2O76062 418 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 MICAL2O94851 1124 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 FAM200BP0CF97 657 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 SRGAP2BP0DMP2 458 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 LBRQ14739 615 aaKnown RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 SLC5A9Q2M3M2 681 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 ATF7IP2Q5U623 682 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 PCDH20Q8N6Y1 951 aaKnown RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 GJD4Q96KN9 370 aaPredicted RBP10.92□□□□□ -0.66
RNF43-207ENST00000583753 KCNK16Q96T55 309 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 B3GNT5Q9BYG0 378 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 THAP1Q9NVV9 213 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 PLLPQ9Y342 182 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 COQ4Q9Y3A0 265 aa10.92□□□□□ -0.66
RNF43-207ENST00000583753 RNF103-CHMP3A0A140T963 221 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 ERBB2P04626 1255 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 SUPT20HL2P0C7V6 817 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 EPHA3P29320 983 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 NOVP48745 357 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 ATXN1P54253 815 aaKnown RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 SUPT20HL1Q3ZLR7 823 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 CDKL3Q8IVW4 592 aaPredicted RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 AZIN2Q96A70 460 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 HPDLQ96IR7 371 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 BTBD7Q9P203 1132 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 EPS15L1Q9UBC2 864 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 ADAMTS7Q9UKP4 1686 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 SNX13Q9Y5W8 968 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 IRS2Q9Y4H2 1338 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 OGTO15294 1046 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 RNASEH1O60930 286 aaKnown RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 FKBP6O75344 327 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 DLDP09622 509 aaKnown RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 CPA3P15088 417 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 TCF7P36402 384 aaPredicted RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 OCRLQ01968 901 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 GBE1Q04446 702 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 FOLH1Q04609 750 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 RSBN1LQ6PCB5 846 aaPredicted RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 UNC5AQ6ZN44 842 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 ACAD11Q709F0 780 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 NET1Q7Z628 596 aaPredicted RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 SAMD3Q8N6K7 520 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 RNF169Q8NCN4 708 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 NKD2Q969F2 451 aaPredicted RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 LGMNQ99538 433 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 KRT82Q9NSB4 513 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 HBS1LQ9Y450 684 aaKnown RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 NUMBLQ9Y6R0 609 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 NOL3O60936 208 aaKnown RBP10.91□□□□□ -0.66
RNF43-207ENST00000583753 VAV1P15498 845 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 VCLP18206 1134 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 CYP2F1P24903 491 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 ETFBP38117 255 aa10.91□□□□□ -0.66
RNF43-207ENST00000583753 USP46P62068 366 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms