RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 PDXKO00764 312 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 ATP8B3O60423 1300 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 GREM1O60565 184 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 SERPINF2P08697 491 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 FASNP49327 2511 aaKnown RBP21.6■■□□□ 1.05
SRSF1-206ENST00000583741 ATXN3P54252 364 aaPredicted RBP21.6■■□□□ 1.05
SRSF1-206ENST00000583741 GFPT1Q06210 699 aaPredicted RBP21.6■■□□□ 1.05
SRSF1-206ENST00000583741 ZNF33AQ06730 810 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 SCARA5Q6ZMJ2 495 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 SLC41A1Q8IVJ1 513 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 FUKQ8N0W3 1084 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 ZMIZ2Q8NF64 920 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 SMARCD1Q96GM5 515 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 HSD3B7Q9H2F3 369 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 VRTNQ9H8Y1 702 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 KRT82Q9NSB4 513 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 MSRB2Q9Y3D2 182 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 STARD13Q9Y3M8 1113 aa21.6■■□□□ 1.05
SRSF1-206ENST00000583741 LOC400499M0QZD8 3231 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 IGHV1OR15-9A0A0B4J2B8 117 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 BEST1O76090 585 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 NDUFV2P19404 249 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 NTSR1P30989 418 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 ZNF699Q32M78 642 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 SLC36A4Q6YBV0 504 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 CEP76Q8TAP6 659 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 CD93Q9NPY3 652 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 SAMSN1Q9NSI8 373 aaKnown RBP21.59■■□□□ 1.05
SRSF1-206ENST00000583741 TRAF3IP3Q9Y228 551 aa21.59■■□□□ 1.05
SRSF1-206ENST00000583741 CALUO43852 315 aaPredicted RBP21.58■■□□□ 1.05
SRSF1-206ENST00000583741 PHACTR2O75167 634 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 AP1G2O75843 785 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 SNRPFP62306 86 aaKnown RBP21.58■■□□□ 1.05
SRSF1-206ENST00000583741 ORC1Q13415 861 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 COL9A2Q14055 689 aaPredicted RBP21.58■■□□□ 1.05
SRSF1-206ENST00000583741 EDRF1Q3B7T1 1238 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 PREPLQ4J6C6 727 aaPredicted RBP21.58■■□□□ 1.05
SRSF1-206ENST00000583741 GRAMD4Q6IC98 578 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 HDDC3Q8N4P3 179 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 MINDY1Q8N5J2 469 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 SMOQ99835 787 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 NACA2Q9H009 215 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 DNAJC17Q9NVM6 304 aaKnown RBP21.58■■□□□ 1.05
SRSF1-206ENST00000583741 CYP8B1Q9UNU6 501 aa21.58■■□□□ 1.05
SRSF1-206ENST00000583741 NEDD8-MDP1E9PL57 170 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 TLR5O60602 858 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 TBX18O95935 607 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 CCDC130P13994 396 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 ZNF18P17022 549 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 BIRC3Q13489 604 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 HSP90AA4PQ58FG1 418 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 CDKAL1Q5VV42 579 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 ACOT1Q86TX2 421 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 C12orf56Q8IXR9 622 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 CHPFQ8IZ52 775 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 IPO4Q8TEX9 1081 aaKnown RBP21.58■■□□□ 1.04
SRSF1-206ENST00000583741 TNIP3Q96KP6 325 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 HSPA12BQ96MM6 686 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 SRRTQ9BXP5 876 aaKnown RBP21.58■■□□□ 1.04
SRSF1-206ENST00000583741 SLC6A17Q9H1V8 727 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 THAP9Q9H5L6 903 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 HMGXB4Q9UGU5 601 aa21.58■■□□□ 1.04
SRSF1-206ENST00000583741 PRRT4C9JH25 899 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 CACNG3O60359 315 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 EXOC3O60645 756 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 OPHN1O60890 802 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 CLSTN1O94985 981 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 FGFR1OPO95684 399 aaKnown RBP21.57■■□□□ 1.04
SRSF1-206ENST00000583741 CD59P13987 128 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 CDK11BP21127 795 aaKnown RBP21.57■■□□□ 1.04
SRSF1-206ENST00000583741 FKBP3Q00688 224 aaKnown RBP21.57■■□□□ 1.04
SRSF1-206ENST00000583741 ZNF667Q5HYK9 610 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 TOGARAM2Q6ZUX3 1019 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 NUDT18Q6ZVK8 323 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 HTR3DQ70Z44 454 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 GOLGA5Q8TBA6 731 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 GABRG3Q99928 467 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 COMMD8Q9NX08 183 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 RAD54BQ9Y620 910 aa21.57■■□□□ 1.04
SRSF1-206ENST00000583741 LRRIQ3A6PVS8 624 aaPredicted RBP21.56■■□□□ 1.04
SRSF1-206ENST00000583741 ARHGAP33O14559 1287 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 VNN1O95497 513 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 ATP1A3P13637 1013 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 TYRP14679 529 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 NCOA4Q13772 614 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 TPGS1Q6ZTW0 290 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 RABEPKQ7Z6M1 372 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 SLC2A14Q8TDB8 520 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 PARD3BQ8TEW8 1205 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 BBS2Q9BXC9 721 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 KLF16Q9BXK1 252 aaPredicted RBP21.56■■□□□ 1.04
SRSF1-206ENST00000583741 OSER1Q9NX31 292 aa21.56■■□□□ 1.04
SRSF1-206ENST00000583741 ZNF217O75362 1048 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 NR2F2P24468 414 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 MAP3K7CLP57077 242 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 CLDN10P78369 228 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 RING1Q06587 406 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 GPRIN1Q7Z2K8 1008 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 FAM114A1Q8IWE2 563 aa21.55■■□□□ 1.04
SRSF1-206ENST00000583741 CHCHD4Q8N4Q1 142 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms