RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 USP18Q9UMW8 372 aa12.51□□□□□ -0.41
CCDC57-216ENST00000582885 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
CCDC57-216ENST00000582885 HYOU1Q9Y4L1 999 aa12.51□□□□□ -0.41
CCDC57-216ENST00000582885 MTCH2Q9Y6C9 303 aa12.51□□□□□ -0.41
CCDC57-216ENST00000582885 CLUHO75153 1309 aa12.51□□□□□ -0.41
CCDC57-216ENST00000582885 BRWD1Q9NSI6 2320 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 ENC1O14682 589 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 ZNF197O14709 1029 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 MDM4O15151 490 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 PRPSAP2O60256 369 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 TLR5O60602 858 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 GLP2RO95838 553 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 OLFM2O95897 454 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 SLC2A3P11169 496 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 DDX6P26196 483 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 GABRR2P28476 465 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 PITX1P78337 314 aaPredicted RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 AMPD2Q01433 879 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 RING1Q06587 406 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 SCAPQ12770 1279 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 MTA1Q13330 715 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 PPP2R5DQ14738 602 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 COL19A1Q14993 1142 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 BRMS1LQ5PSV4 323 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 C10orf120Q5SQS8 335 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 CYP4V2Q6ZWL3 525 aaPredicted RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 MRPS31Q92665 395 aaKnown RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 NTAN1Q96AB6 310 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 PBKQ96KB5 322 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 GCNAQ96QF7 691 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 CARD9Q9H257 536 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 WDR6Q9NNW5 1121 aaKnown RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 PIGVQ9NUD9 493 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 DDIT4Q9NX09 232 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 MARCH2Q9P0N8 246 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 CALCOCO1Q9P1Z2 691 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 DNMT3BQ9UBC3 853 aaKnown RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 TLR6Q9Y2C9 796 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 HBS1LQ9Y450 684 aaKnown RBP12.5□□□□□ -0.41
CCDC57-216ENST00000582885 SAR1BQ9Y6B6 198 aa12.5□□□□□ -0.41
CCDC57-216ENST00000582885 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 SOX1O00570 391 aaPredicted RBP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 IGLV3-27P01718 113 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 MYL4P12829 197 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 TCF4P15884 667 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 IL1R2P27930 398 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 SSR1P43307 286 aaKnown RBP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 RWDD2BP57060 319 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 NME3Q13232 169 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 CTC1Q2NKJ3 1217 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 RAB6CQ53S08 254 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 PRSS36Q5K4E3 855 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 ERMARDQ5T6L9 678 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 ANKRD54Q6NXT1 300 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 PDZD4Q76G19 769 aaPredicted RBP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 VSIG1Q86XK7 387 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 RCOR2Q8IZ40 523 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 EXD1Q8NHP7 514 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 FAM71BQ8TC56 605 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 SMG7Q92540 1137 aaKnown RBP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 ALG3Q92685 438 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 KRT35Q92764 455 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 SLC39A13Q96H72 371 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 PEBP4Q96S96 227 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 OSBPL9Q96SU4 736 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 RAB6CQ9H0N0 254 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 IGFLR1Q9H665 355 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC57-216ENST00000582885 HCFC1R1Q9NWW0 138 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 ARHGEF38Q9NXL2 777 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 SFMBT1Q9UHJ3 866 aa12.49□□□□□ -0.41
CCDC57-216ENST00000582885 KCNU1A8MYU2 1149 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 COCHO43405 550 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 ZRANB2O95218 330 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCDC57-216ENST00000582885 RHOP08100 348 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 RARAP10276 462 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 CCR1P32246 355 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 ADRA1BP35368 520 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 MARCKSL1P49006 195 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 TBX4P57082 545 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 COPS2P61201 443 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 COG7P83436 770 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 RBM10P98175 930 aaKnown RBP12.48□□□□□ -0.41
CCDC57-216ENST00000582885 EFEMP1Q12805 493 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 ADGRE1Q14246 886 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 PDK2Q15119 407 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 CLUL1Q15846 466 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 ARL13BQ3SXY8 428 aa12.48□□□□□ -0.41
CCDC57-216ENST00000582885 DNTTIP2Q5QJE6 756 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms