RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 KCNK3O14649 394 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 ATICP31939 592 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 TXLNAP40222 546 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 PLA2G4AP47712 749 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 PSMD6Q15008 389 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 SNRNP35Q16560 246 aaKnown RBP13.43□□□□□ -0.26
SS18-219ENST00000581570 GEN1Q17RS7 908 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 FAM124AQ86V42 546 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 CCDC65Q8IXS2 484 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 LSM14AQ8ND56 463 aaKnown RBP13.43□□□□□ -0.26
SS18-219ENST00000581570 ZMIZ2Q8NF64 920 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
SS18-219ENST00000581570 SMOQ99835 787 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 XYLT2Q9H1B5 865 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 SMYD3Q9H7B4 428 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 CYLDQ9NQC7 956 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 KRT82Q9NSB4 513 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 SLCO1B1Q9Y6L6 691 aa13.43□□□□□ -0.26
SS18-219ENST00000581570 BPTFQ12830 3046 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 MDM4O15151 490 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 PCDHGA12O60330 932 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 PHACTR2O75167 634 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 BEST1O76090 585 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 JUPP14923 745 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 EIF2S3P41091 472 aaKnown RBP13.42□□□□□ -0.26
SS18-219ENST00000581570 CCT8P50990 548 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 COPAP53621 1224 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 MFAP3P55082 362 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 MAP3K7CLP57077 242 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 CYP24A1Q07973 514 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 ORC1Q13415 861 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 ZNF234Q14588 700 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 E2F5Q15329 346 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
SS18-219ENST00000581570 Q6ZNB5 142 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 CACUL1Q86Y37 369 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 FUKQ8N0W3 1084 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 ZNF516Q92618 1163 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 IGSF8Q969P0 613 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 NXPE2Q96DL1 559 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 P2RY11Q96G91 374 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 C6orf106Q9H6K1 298 aaPredicted RBP13.42□□□□□ -0.26
SS18-219ENST00000581570 TM9SF3Q9HD45 589 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 OSER1Q9NX31 292 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 ELOVL2Q9NXB9 296 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 RAI2Q9Y5P3 530 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 CLIC4Q9Y696 253 aa13.42□□□□□ -0.26
SS18-219ENST00000581570 H0Y8X5 98 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
SS18-219ENST00000581570 CLSTN1O94985 981 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 PENKP01210 267 aaPredicted RBP13.41□□□□□ -0.26
SS18-219ENST00000581570 EPHX1P07099 455 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 RARGP13631 454 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 CCDC130P13994 396 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 PRKCHP24723 683 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 HOXD13P35453 343 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 GRIA4P48058 902 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 SEMG2Q02383 582 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 INAVAQ3KP66 663 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 C6orf118Q5T5N4 469 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 FYB2Q5VWT5 728 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 ZNF843Q8N446 348 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 HPS3Q969F9 1004 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 CLIC6Q96NY7 704 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 NMUR1Q9HB89 426 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 CSNK1G1Q9HCP0 422 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 OSGEPQ9NPF4 335 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 FTSJ1Q9UET6 329 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 FBXO2Q9UK22 296 aaPredicted RBP13.41□□□□□ -0.26
SS18-219ENST00000581570 NUDT5Q9UKK9 219 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 SCML2Q9UQR0 700 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 ZNF510Q9Y2H8 683 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 SRPRBQ9Y5M8 271 aaKnown RBP13.41□□□□□ -0.26
SS18-219ENST00000581570 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
SS18-219ENST00000581570 FLNBO75369 2602 aaKnown RBP13.41□□□□□ -0.26
SS18-219ENST00000581570 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 CAPN9O14815 690 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 CLIC2O15247 247 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 CYP26A1O43174 497 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 TLX3O43711 291 aaPredicted RBP13.4□□□□□ -0.26
SS18-219ENST00000581570 STC2O76061 302 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 ACSL1P33121 698 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 HNF1BP35680 557 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 CHKAP35790 457 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 STAT6P42226 847 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 CYP2J2P51589 502 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 IL9RQ01113 521 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 C10orf120Q5SQS8 335 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 SCARA5Q6ZMJ2 495 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 ANKS1BQ7Z6G8 1248 aa13.4□□□□□ -0.26
SS18-219ENST00000581570 OR2T3Q8NH03 318 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms