RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 ANGPT1Q15389 498 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 LY6G5CQ5SRR4 150 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 RNF43Q68DV7 783 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 TMEM25Q86YD3 366 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 ZDHHC17Q8IUH5 632 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 TMEM35BQ8NCS4 154 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 C1orf131Q8NDD1 294 aaKnown RBP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 NEK11Q8NG66 645 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 SLC39A13Q96H72 371 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 NOX5Q96PH1 765 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 P2RY13Q9BPV8 354 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 TRIM62Q9BVG3 475 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 EDEM3Q9BZQ6 932 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 ST7Q9NRC1 585 aa13.2□□□□□ -0.3
SNORD55-201ENST00000581525 AGO1Q9UL18 857 aaKnown RBP13.2□□□□□ -0.3
SNORD55-201ENST00000581525 K7EQS6 105 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 ADH5P11766 374 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 CHKAP35790 457 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
SNORD55-201ENST00000581525 CDR2Q01850 454 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 NHLH1Q02575 133 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 MTAPQ13126 283 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 PTPN20Q4JDL3 420 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 EFHC1Q5JVL4 640 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
SNORD55-201ENST00000581525 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 ARCQ7LC44 396 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 MIB1Q86YT6 1006 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 RNF139Q8WU17 664 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 BAP1Q92560 729 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 EDEM1Q92611 657 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 P2RY11Q96G91 374 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 SYT11Q9BT88 431 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 MIS12Q9H081 205 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 POPDC2Q9HBU9 364 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 TJP2Q9UDY2 1190 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
SNORD55-201ENST00000581525 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 PIK3R2O00459 728 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 CACNG3O60359 315 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 EGFP01133 1207 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 MMEP08473 750 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 CISD3P0C7P0 127 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 SP9P0CG40 484 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 IRF1P10914 325 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 UNGP13051 313 aaPredicted RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 NBL1P41271 181 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 TNFRSF4P43489 277 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 NOMO3P69849 1222 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 FMO1Q01740 532 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 SYPL2Q5VXT5 272 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 LRSAM1Q6UWE0 723 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 OLFML1Q6UWY5 402 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 RSRC2Q7L4I2 434 aaKnown RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 C12orf40Q86WS4 652 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 UNC45BQ8IWX7 931 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 CCDC26Q8TAB7 109 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 DQX1Q8TE96 717 aaKnown RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 PNKPQ96T60 521 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 FAM126AQ9BYI3 521 aaPredicted RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
SNORD55-201ENST00000581525 TMEM51Q9NW97 253 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 SFMBT1Q9UHJ3 866 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 CACNA1IQ9P0X4 2223 aa13.18□□□□□ -0.3
SNORD55-201ENST00000581525 MIA3Q5JRA6 1907 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
SNORD55-201ENST00000581525 H0Y858 1186 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 GFPT2O94808 682 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 ERBB2P04626 1255 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 NCAM1P13591 858 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
SNORD55-201ENST00000581525 GRIA2P42262 883 aa13.17□□□□□ -0.3
SNORD55-201ENST00000581525 SLC6A11P48066 632 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms