RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 MFSD11O43934 449 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 CDH16O75309 829 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 LTFP02788 710 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ITGB1P05556 798 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 COL6A1P12109 1028 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 TSHRP16473 764 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 GOT1P17174 413 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 IL4RP24394 825 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 STIP1P31948 543 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 LSP1P33241 339 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 PHBP35232 272 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 MMP13P45452 471 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SLCO1A2P46721 670 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 NR2C2P49116 596 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 NDUFV1P49821 464 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 PITX1P78337 314 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 GUCY1A3Q02108 690 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 GBE1Q04446 702 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 YWHAHQ04917 246 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SCAPQ12770 1279 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 PDIA2Q13087 525 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 NME3Q13232 169 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 XRCC4Q13426 336 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 BFSP2Q13515 415 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 AUHQ13825 339 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 KCNJ11Q14654 390 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 FASTKD3Q14CZ7 662 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ZSCAN26Q16670 478 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 LONRF1Q17RB8 773 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SLC45A4Q5BKX6 768 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ANKRD22Q5VYY1 191 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 NCBP2-AS2Q69YL0 99 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 TTC19Q6DKK2 380 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 FAM171BQ6P995 826 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 C4orf50Q6ZRC1 276 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 FAM43BQ6ZT52 329 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 HFE2Q6ZVN8 426 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SPATA2LQ8IUW3 424 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ZBED8Q8IZ13 594 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SCML4Q8N228 414 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SPDYE1Q8NFV5 336 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SLC7A14Q8TBB6 771 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 RNF139Q8WU17 664 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ZNF296Q8WUU4 475 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 NDRG1Q92597 394 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 OLFM3Q96PB7 478 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 SLC9A7Q96T83 725 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 RHOBTB2Q9BYZ6 727 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 FRMD8Q9BZ67 464 aaPredicted RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 KLC2Q9H0B6 622 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 ARHGEF4Q9NR80 690 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 TMEM30AQ9NV96 361 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 TBC1D13Q9NVG8 400 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 TMEM161AQ9NX61 479 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 MTMR10Q9NXD2 777 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 CWC15Q9P013 229 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 COX16Q9P0S2 106 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 CALCOCO1Q9P1Z2 691 aa6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-217ENST00000580583 NLRC5Q86WI3 1866 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 HACD1B0YJ81 288 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 E7ESA3 106 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 F8W810 466 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 GOLGA8MH3BSY2 632 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 EEF2KO00418 725 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 PPP1R12AO14974 1030 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 TRAPPC3O43617 180 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 B4GALT3O60512 393 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 STK10O94804 968 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 USP17L7P0C7H9 530 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 NCAM1P13591 858 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 BDNFP23560 247 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 RBL1P28749 1068 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 MAGEA6P43360 314 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 VEGFBP49765 207 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 ZNF135P52742 658 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 FAM189BP81408 668 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 NR1H3Q13133 447 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 DPYSQ14117 519 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 TMED2Q15363 201 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 SKIDA1Q1XH10 827 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 KLHL38Q2WGJ6 581 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 ARL13BQ3SXY8 428 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 CCDC38Q502W7 563 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 TNFAIP8L3Q5GJ75 292 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 SYPL2Q5VXT5 272 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 HEATR6Q6AI08 1181 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 LRRC31Q6UY01 552 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 RFX8Q6ZV50 586 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 BEND5Q7L4P6 421 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 BHLHA9Q7RTU4 235 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 CCDC13Q8IYE1 715 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 COLGALT2Q8IYK4 626 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 ABI1Q8IZP0 508 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 PDIK1LQ8N165 341 aa6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 TAB3Q8N5C8 712 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-217ENST00000580583 SEPT8Q92599 483 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms