RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 NOTUMQ6P988 496 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 C6orf15Q6UXA7 325 aaPredicted RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 CD300LGQ6UXG3 332 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 USP49Q70CQ1 688 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 DDX53Q86TM3 631 aaKnown RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 MRPL43Q8N983 215 aaKnown RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 IGSF22Q8N9C0 903 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 ERMNQ8TAM6 284 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 URGCPQ8TCY9 931 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 SUSD6Q92537 303 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 PGBD4Q96DM1 585 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 TMEM169Q96HH4 297 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 CHAMP1Q96JM3 812 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 KLHL5Q96PQ7 755 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 FAM193BQ96PV7 902 aaPredicted RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 JPH2Q9BR39 696 aaPredicted RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 HERC2P3Q9BVR0 1158 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 MRPL9Q9BYD2 267 aaKnown RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 HAPLN2Q9GZV7 340 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 ACBD3Q9H3P7 528 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 FZD8Q9H461 694 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 CHST12Q9NRB3 414 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 NOL7Q9UMY1 257 aaKnown RBP4.36□□□□□ -1.71
DDX42-211ENST00000580108 SMC3Q9UQE7 1217 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 LZTS1Q9Y250 596 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 CNTNAP2Q9UHC6 1331 aa4.36□□□□□ -1.71
DDX42-211ENST00000580108 TSC2P49815 1807 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TCHHQ07283 1943 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 SCN1AP35498 2009 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 A0A1B0GUA9 196 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 LOC730098B7Z3J9 87 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TISP43B9A030 160 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 H3BQV1 296 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 N4BP1O75113 896 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 TADA3O75528 432 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TACR2P21452 398 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 KLRC2P26717 231 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 MARCKSP29966 332 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 PPM1AP35813 382 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 BRCC3P46736 316 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 NPTX2P47972 431 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 GUCY2FP51841 1108 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 VCPP55072 806 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 ATP2C1P98194 919 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 CEBPZQ03701 1054 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 KRT17Q04695 432 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 RESTQ13127 1097 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 KCNAB2Q13303 367 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 PRPF4BQ13523 1007 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 MXD4Q14582 209 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 KARSQ15046 597 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 NAB2Q15742 525 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TMEM119Q4V9L6 283 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 EMC4Q5J8M3 183 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 ZBTB41Q5SVQ8 909 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 ACBD5Q5T8D3 534 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 ATF7IP2Q5U623 682 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 LARP1BQ659C4 914 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 MRM1Q6IN84 353 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 IQCEQ6IPM2 695 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 RINT1Q6NUQ1 792 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 FUT10Q6P4F1 479 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 SLC27A1Q6PCB7 646 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TEPPQ6URK8 271 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 C1orf186Q6ZWK4 172 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 PALB2Q86YC2 1186 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 ZBTB8OSQ8IWT0 167 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 RNF168Q8IYW5 571 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 MCPH1Q8NEM0 835 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 DEPTORQ8TB45 409 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 RSAD2Q8WXG1 361 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 RIN2Q8WYP3 895 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 PPP2R3CQ969Q6 453 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 C18orf25Q96B23 403 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 TOE1Q96GM8 510 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 C1orf159Q96HA4 380 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 ZMAT2Q96NC0 199 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 CLIC6Q96NY7 704 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TARS2Q9BW92 718 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 TRIM6Q9C030 488 aaPredicted RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 CDT1Q9H211 546 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 NGRNQ9NPE2 291 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 MAN1C1Q9NR34 630 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 BLOC1S4Q9NUP1 217 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 DTLQ9NZJ0 730 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 PUF60Q9UHX1 559 aaKnown RBP4.35□□□□□ -1.71
DDX42-211ENST00000580108 STRIP2Q9ULQ0 834 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 TSC22D4Q9Y3Q8 395 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 PCDHB4Q9Y5E5 795 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 CLIC4Q9Y696 253 aa4.35□□□□□ -1.71
DDX42-211ENST00000580108 A0A087X0B3 334 aa4.34□□□□□ -1.71
DDX42-211ENST00000580108 ANKRD63C9JTQ0 380 aa4.34□□□□□ -1.71
DDX42-211ENST00000580108 ACKR2O00590 384 aa4.34□□□□□ -1.71
DDX42-211ENST00000580108 PPEF2O14830 753 aa4.34□□□□□ -1.71
DDX42-211ENST00000580108 HGSO14964 777 aaPredicted RBP4.34□□□□□ -1.71
DDX42-211ENST00000580108 SMAD7O15105 426 aaKnown RBP4.34□□□□□ -1.71
DDX42-211ENST00000580108 INPPL1O15357 1258 aa4.34□□□□□ -1.71
DDX42-211ENST00000580108 NCK2O43639 380 aa4.34□□□□□ -1.71
DDX42-211ENST00000580108 NARSO43776 548 aaKnown RBP4.34□□□□□ -1.71
DDX42-211ENST00000580108 SLPIP03973 132 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms