RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PCDHB8Q9UN66 801 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 YIPF1Q9Y548 306 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 SCINQ9Y6U3 715 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 KIF26AQ9ULI4 1882 aaPredicted RBP10.68□□□□□ -0.7
SS18-210ENST00000578700 GRID2IPA4D2P6 1211 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 FANCGO15287 622 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 RPP40O75818 363 aaKnown RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 SOAT2O75908 522 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 FTCDO95954 541 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 CYP1A2P05177 515 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 EPHA5P54756 1037 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 SNX16P57768 344 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 CENPCQ03188 943 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 TNK2Q07912 1038 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 STILQ15468 1287 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 ZNF394Q53GI3 561 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 SGO2Q562F6 1265 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 TEX35Q5T0J7 233 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 GPR158Q5T848 1215 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 NAA35Q5VZE5 725 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 C1orf228Q6PIY5 440 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 DSTYKQ6XUX3 929 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 RALGPS2Q86X27 583 aaPredicted RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 UBR7Q8N806 425 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 ZNF606Q8WXB4 792 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 MSANTD3Q96H12 275 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 TMEM176AQ96HP8 235 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 PBKQ96KB5 322 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 CAPZA3Q96KX2 299 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 NUP85Q9BW27 656 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 NT5C1AQ9BXI3 368 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 MIS12Q9H081 205 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 SYNCQ9H7C4 482 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 ACP6Q9NPH0 428 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 POLR3BQ9NW08 1133 aaPredicted RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 ARGLU1Q9NWB6 273 aaPredicted RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 TAS2R14Q9NYV8 317 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 ADAM22Q9P0K1 906 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 CNOT8Q9UFF9 292 aaKnown RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 SALL4Q9UJQ4 1053 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 STRIP2Q9ULQ0 834 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 SLC8A2Q9UPR5 921 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 ZFYVE26Q68DK2 2539 aa10.67□□□□□ -0.7
SS18-210ENST00000578700 NUP210Q8TEM1 1887 aaPredicted RBP10.67□□□□□ -0.7
SS18-210ENST00000578700 DMXL2Q8TDJ6 3036 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 ATG2BQ96BY7 2078 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 CES2O00748 559 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 HUS1O60921 280 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 CILPO75339 1184 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 TADA3O75528 432 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 MTA2O94776 668 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 KCNK5O95279 499 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 CYP1A1P04798 512 aaPredicted RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 TUBBP07437 444 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 ZNF806P0C7X5 589 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 VDRP11473 427 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 UNGP13051 313 aaPredicted RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 GABRR2P28476 465 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 TAF6P49848 677 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 MLLT6P55198 1093 aaPredicted RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 CYP4F8P98187 520 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 PLD1Q13393 1074 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 ZBTB6Q15916 424 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 ARHGAP15Q53QZ3 475 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 C9orf57Q5W0N0 161 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 PSAPL1Q6NUJ1 521 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 PKN3Q6P5Z2 889 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 DNAJB7Q7Z6W7 309 aaPredicted RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 PHF13Q86YI8 300 aaPredicted RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 TMC8Q8IU68 726 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 ATAD1Q8NBU5 361 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 BPIFB1Q8TDL5 484 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 CPA5Q8WXQ8 436 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 CYFIP2Q96F07 1278 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 HEXIM2Q96MH2 286 aaKnown RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 TLR10Q9BXR5 811 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 LRRC3Q9BY71 257 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 SMG9Q9H0W8 520 aaKnown RBP10.66□□□□□ -0.7
SS18-210ENST00000578700 CRISPLD1Q9H336 500 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 SNX25Q9H3E2 840 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 SMYD3Q9H7B4 428 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 PARVAQ9NVD7 372 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 MAFFQ9ULX9 164 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 PCDHGC3Q9UN70 934 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 SNX9Q9Y5X1 595 aa10.66□□□□□ -0.7
SS18-210ENST00000578700 EML5Q05BV3 1969 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 AKAP13Q12802 2813 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 TMEM110-MUSTN1A8MSY1 372 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 KPNA7A9QM74 516 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 KCNK3O14649 394 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 TM4SF5O14894 197 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 MEFVO15553 781 aaPredicted RBP10.65□□□□□ -0.7
SS18-210ENST00000578700 SPOPO43791 374 aa10.65□□□□□ -0.7
SS18-210ENST00000578700 BUB1BO60566 1050 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms