RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 MESDQ14696 234 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 SLC25A52Q3SY17 297 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 MSANTD2Q6P1R3 559 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 BEND5Q7L4P6 421 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 ST13P5Q8NFI4 369 aaPredicted RBP12.66□□□□□ -0.38
IFT20-207ENST00000578547 ZSCAN18Q8TBC5 510 aaPredicted RBP12.66□□□□□ -0.38
IFT20-207ENST00000578547 ATXN2LQ8WWM7 1075 aaKnown RBP12.66□□□□□ -0.38
IFT20-207ENST00000578547 ASB2Q96Q27 587 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 CNPY3Q9BT09 278 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 PHF7Q9BWX1 381 aaPredicted RBP12.66□□□□□ -0.38
IFT20-207ENST00000578547 TSGA10Q9BZW7 698 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 SMOC2Q9H3U7 446 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 TRMT1Q9NXH9 659 aaKnown RBP12.66□□□□□ -0.38
IFT20-207ENST00000578547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.66□□□□□ -0.38
IFT20-207ENST00000578547 CDH7Q9ULB5 785 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 USTQ9Y2C2 406 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 COL6A3P12111 3177 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 A0A0A6YYK5 440 aaPredicted RBP12.65□□□□□ -0.38
IFT20-207ENST00000578547 MYO1FO00160 1098 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 DPYSL4O14531 572 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 PJA2O43164 708 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 KRT86O43790 486 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 TRUB2O95900 331 aaKnown RBP12.65□□□□□ -0.38
IFT20-207ENST00000578547 BMP1P13497 986 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 PTPN9P43378 593 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 ZNF143P52747 638 aaPredicted RBP12.65□□□□□ -0.38
IFT20-207ENST00000578547 DEUP1Q05D60 604 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 RAB6CQ53S08 254 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 SH3PXD2AQ5TCZ1 1133 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 OTUD1Q5VV17 481 aaPredicted RBP12.65□□□□□ -0.38
IFT20-207ENST00000578547 ARCQ7LC44 396 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 CMTM8Q8IZV2 173 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 RNF34Q969K3 372 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 RPGRIP1Q96KN7 1286 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 SERPINB11Q96P15 392 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 NPY6RQ99463 290 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 ADAM33Q9BZ11 813 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 RAB6CQ9H0N0 254 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 RRN3Q9NYV6 651 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 GDE1Q9NZC3 331 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 SALL4Q9UJQ4 1053 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 FAM50BQ9Y247 325 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 PAXBP1Q9Y5B6 917 aa12.65□□□□□ -0.38
IFT20-207ENST00000578547 XIRP2A4UGR9 3374 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 C2CD4DB7Z1M9 353 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 SCAMP3O14828 347 aaKnown RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 IRAK2O43187 625 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 MTA2O94776 668 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 MOCS3O95396 460 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 OLFM2O95897 454 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 LAMP2P13473 410 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 PFKLP17858 780 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 GBP1P32455 592 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 RDXP35241 583 aaKnown RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 ARHGAP25P42331 645 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 SSR1P43307 286 aaKnown RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 ATXN1P54253 815 aaKnown RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 TBX4P57082 545 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 DAB2IPQ5VWQ8 1189 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 SCYL2Q6P3W7 929 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 SND1Q7KZF4 910 aaKnown RBP eCLIP12.64□□□□□ -0.39
IFT20-207ENST00000578547 OTOP3Q7RTS5 596 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 ARID3BQ8IVW6 561 aaPredicted RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 ZNF276Q8N554 614 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
IFT20-207ENST00000578547 GOLPH3Q9H4A6 298 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 GKN1Q9NS71 199 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 PIGVQ9NUD9 493 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 CALCOCO1Q9P1Z2 691 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 IP6K2Q9UHH9 426 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 ZMYM5Q9UJ78 669 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 CCL26Q9Y258 94 aa12.64□□□□□ -0.39
IFT20-207ENST00000578547 HELZP42694 1942 aaKnown RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 BTNL10A8MVZ5 291 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 LEFTY2O00292 366 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 BUB1BO60566 1050 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 RNF8O76064 485 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 PROSCO94903 275 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 MOCS2O96007 188 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 DEKP35659 375 aaKnown RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 GJC1P36383 396 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 VIPR2P41587 438 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 SLC7A9P82251 487 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 PIGHQ14442 188 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms