RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SCAPQ12770 1279 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 KYNUQ16719 465 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 SKIDA1Q1XH10 827 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 PLEKHG4Q58EX7 1191 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 SLC45A4Q5BKX6 768 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 ZC3H12AQ5D1E8 599 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 ACBD5Q5T8D3 534 aaPredicted RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 HEATR6Q6AI08 1181 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 CYP4V2Q6ZWL3 525 aaPredicted RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 ZC3H18Q86VM9 953 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 PALM2Q8IXS6 379 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 COLGALT2Q8IYK4 626 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 FAM71DQ8N9W8 422 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 ATP11CQ8NB49 1132 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 OR2W6PQ8NHA6 318 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 PCDH19Q8TAB3 1148 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 CLEC4CQ8WTT0 213 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 TFB1MQ8WVM0 346 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 RNF34Q969K3 372 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 CENPTQ96BT3 561 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 TLCD1Q96CP7 247 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 CSPG4P5Q96PW8 444 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 EPAS1Q99814 870 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 WDCPQ9H6R7 721 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 NINJ2Q9NZG7 142 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 SENP1Q9P0U3 644 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 FETUBQ9UGM5 382 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 ENPP3O14638 875 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 ACSL3O95573 720 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 SLC2A3P11169 496 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 PECAM1P16284 738 aaPredicted RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 MX2P20592 715 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 BDNFP23560 247 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 GBP2P32456 591 aaPredicted RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 HPDP32754 393 aaPredicted RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 ADRA1BP35368 520 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 CHKAP35790 457 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 IRAK1P51617 712 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 CBLBQ13191 982 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 NME3Q13232 169 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 KLHL38Q2WGJ6 581 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 BRMS1LQ5PSV4 323 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 KIAA0319Q5VV43 1072 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 ZNF280DQ6N043 979 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 RTN4RL1Q86UN2 441 aaPredicted RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 FAM131BQ86XD5 332 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 SPATS2Q86XZ4 545 aaKnown RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 UNC45BQ8IWX7 931 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 VPS52Q8N1B4 723 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 NAT8LQ8N9F0 302 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 RNF139Q8WU17 664 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 C2orf15Q8WU43 125 aaKnown RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 LRRC39Q96DD0 335 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 C8orf48Q96LL4 319 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 ADAM7Q9H2U9 754 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 VPS37BQ9H9H4 285 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 GPATCH2LQ9NWQ4 482 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.53□□□□□ -0.56
SKA2-204ENST00000578519 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 SLC24A2Q9UI40 661 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 XPO7Q9UIA9 1087 aaKnown RBP11.53□□□□□ -0.56
SKA2-204ENST00000578519 FBXW11Q9UKB1 542 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 PCDHB5Q9Y5E4 795 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 ACTL7BQ9Y614 415 aa11.53□□□□□ -0.56
SKA2-204ENST00000578519 C5orf60A6NFR6 353 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 AP3B1O00203 1094 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 GCATO75600 419 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 BEST1O76090 585 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.57
SKA2-204ENST00000578519 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 ZSCAN5DPP0CG00 497 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 C7P10643 843 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 IL4RP24394 825 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 YY1P25490 414 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 MAGEA11P43364 429 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 NDUFV1P49821 464 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 ATP1A2P50993 1020 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 AFF1P51825 1210 aaKnown RBP11.52□□□□□ -0.57
SKA2-204ENST00000578519 TPI1P60174 286 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 RASA2Q15283 850 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 BSPRYQ5W0U4 402 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 MICALCLQ6ZW33 695 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 BNIPLQ7Z465 357 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 TDRPQ86YL5 185 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 NPAS4Q8IUM7 802 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 SH2D3CQ8N5H7 860 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 PQLC3Q8N755 202 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 MCUQ8NE86 351 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 DBF4BQ8NFT6 615 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 CPT1BQ92523 772 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 PRCCQ92733 491 aaPredicted RBP11.52□□□□□ -0.57
SKA2-204ENST00000578519 CEP295NLQ96MC4 621 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms