RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PGRMC1O00264 195 aaKnown RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 IRAK2O43187 625 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 RARGP13631 454 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 IL1R2P27930 398 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 PTPN7P35236 360 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 MARCKSL1P49006 195 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 CXCR3P49682 368 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 TUBB4BP68371 445 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 ITIH3Q06033 890 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 MTA1Q13330 715 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 EIF4EBP2Q13542 120 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 PDK2Q15119 407 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 ARL13BQ3SXY8 428 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 BRMS1LQ5PSV4 323 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 ERMARDQ5T6L9 678 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 OTUD1Q5VV17 481 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 SCYL2Q6P3W7 929 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 ZNF572Q7Z3I7 529 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 TAC4Q86UU9 113 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 MRPL38Q96DV4 380 aaKnown RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 TLE6Q9H808 572 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 ZWILCHQ9H900 591 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 CERS4Q9HA82 394 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 ZDHHC7Q9NXF8 308 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 PCSK1NQ9UHG2 260 aa13.97□□□□□ -0.17
SRSF1-202ENST00000578430 MTCL1Q9Y4B5 1905 aaKnown RBP13.97□□□□□ -0.17
SRSF1-202ENST00000578430 TMEM265A0A087WTH1 108 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 ZNF840PA6NDX5 716 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 ZNF185O15231 689 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 XYLBO75191 536 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 KRT1P04264 644 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 SPATA31D3P0C874 917 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 RARAP10276 462 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 SLC2A3P11169 496 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PYGMP11217 842 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 TCF4P15884 667 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PFKLP17858 780 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 TFE3P19532 575 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 ZNF135P52742 658 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 SCAPQ12770 1279 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 NME3Q13232 169 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PPP2R5DQ14738 602 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PPP2R5EQ16537 467 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 DUSP6Q16828 381 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 HECTD3Q5T447 861 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 ZFYVE27Q5T4F4 411 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 ACBD5Q5T8D3 534 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 DAB2IPQ5VWQ8 1189 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 SPATA31D4Q6ZUB0 917 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 CYP4V2Q6ZWL3 525 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 LEMD2Q8NC56 503 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 GDPD5Q8WTR4 605 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PEBP4Q96S96 227 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 ADAM33Q9BZ11 813 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PRDM16Q9HAZ2 1276 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 WDR6Q9NNW5 1121 aaKnown RBP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 MAN1C1Q9NR34 630 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 PIGVQ9NUD9 493 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 OSER1Q9NX31 292 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRSF1-202ENST00000578430 LMCD1Q9NZU5 365 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 TLR6Q9Y2C9 796 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 CDH23Q9H251 3354 aa13.96□□□□□ -0.17
SRSF1-202ENST00000578430 CTAGE15A4D2H0 777 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 SOBPA7XYQ1 873 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 TLR5O60602 858 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 SLU7O95391 586 aaKnown RBP13.95□□□□□ -0.18
SRSF1-202ENST00000578430 PAPLNO95428 1278 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 F11P03951 625 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CTAGE8P0CG41 777 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 KDELR1P24390 212 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CDC25CP30307 473 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CCR1P32246 355 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 ADRA1BP35368 520 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 GJC1P36383 396 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 ATP5C1P36542 298 aaKnown RBP13.95□□□□□ -0.18
SRSF1-202ENST00000578430 PGFP49763 221 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 PITX1P78337 314 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-202ENST00000578430 DPYSL2Q16555 572 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 TAZQ16635 292 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 C10orf120Q5SQS8 335 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 TXNRD3NBQ6F5E7 133 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CTAGE6Q86UF2 777 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 FAM131BQ86XD5 332 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CTAGE4Q8IX94 777 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 KCTD6Q8NC69 237 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CASP10Q92851 521 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 GCNAQ96QF7 691 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 SNRNP25Q9BV90 132 aaKnown RBP13.95□□□□□ -0.18
SRSF1-202ENST00000578430 WDCPQ9H6R7 721 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 DZANK1Q9NVP4 752 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRSF1-202ENST00000578430 CHD7Q9P2D1 2997 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 RCOR3Q9P2K3 495 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms