RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 DHX35Q9H5Z1 703 aaKnown RBP23.8■■□□□ 1.4
LIMD2-205ENST00000578402 FAM204AQ9H8W3 233 aa23.8■■□□□ 1.4
LIMD2-205ENST00000578402 DDIT4Q9NX09 232 aa23.8■■□□□ 1.4
LIMD2-205ENST00000578402 MTMR10Q9NXD2 777 aa23.8■■□□□ 1.4
LIMD2-205ENST00000578402 MYO16Q9Y6X6 1858 aa23.8■■□□□ 1.4
LIMD2-205ENST00000578402 ADAM12O43184 909 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 CXCR3P49682 368 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 VCPP55072 806 aaKnown RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 CREMQ03060 361 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 DUSP4Q13115 394 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 NME3Q13232 169 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ANKRD20A8PQ5CZ79 823 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 EFHC2Q5JST6 749 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 PRPF38BQ5VTL8 546 aaKnown RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SLC9A4Q6AI14 798 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SCD5Q86SK9 330 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 TTC9BQ8N6N2 239 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SLC35B2Q8TB61 432 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 DQX1Q8TE96 717 aaKnown RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 CLP1Q92989 425 aaKnown RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SEPT5Q99719 369 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 HINFPQ9BQA5 517 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 HTATIP2Q9BUP3 242 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 CRISPLD1Q9H336 500 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SMOC2Q9H3U7 446 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ZNF446Q9NWS9 450 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 FBXW11Q9UKB1 542 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ABLIM3O94929 683 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ZFXP17010 805 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 TGM2P21980 687 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 YWHAQP27348 245 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 PSEN1P49768 467 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ZNF135P52742 658 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 IFRD2Q12894 506 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 NNTQ13423 1086 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 PTK6Q13882 451 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 OASLQ15646 514 aaKnown RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ARL13BQ3SXY8 428 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 TAC4Q86UU9 113 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 ZNF461Q8TAF7 563 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SP7Q8TDD2 431 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 IFT81Q8WYA0 676 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 KCTD15Q96SI1 283 aaPredicted RBP23.79■■□□□ 1.4
LIMD2-205ENST00000578402 FAM129AQ9BZQ8 928 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 MAFFQ9ULX9 164 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 SLC27A5Q9Y2P5 690 aa23.79■■□□□ 1.4
LIMD2-205ENST00000578402 MKI67P46013 3256 aaKnown RBP23.78■■□□□ 1.4
LIMD2-205ENST00000578402 ITGAVP06756 1048 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 LINC00271P0C7V0 271 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 ADRA1BP35368 520 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 KRT17Q04695 432 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 MMRN1Q13201 1228 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 EIF4EBP2Q13542 120 aaPredicted RBP23.78■■□□□ 1.4
LIMD2-205ENST00000578402 PPP1R7Q15435 360 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 PPP6R3Q5H9R7 873 aaPredicted RBP23.78■■□□□ 1.4
LIMD2-205ENST00000578402 SDHAF4Q5VUM1 108 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 ACTL9Q8TC94 416 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 CAVIN3Q969G5 261 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 CCDC114Q96M63 670 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 ZBED2Q9BTP6 218 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 MTIF3Q9H2K0 278 aaKnown RBP23.78■■□□□ 1.4
LIMD2-205ENST00000578402 CLIC5Q9NZA1 410 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.78■■□□□ 1.47e-7■■□□□ 13.5
LIMD2-205ENST00000578402 CXXC1Q9P0U4 656 aaPredicted RBP23.78■■□□□ 1.4
LIMD2-205ENST00000578402 DNPEPQ9ULA0 475 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 NFU1Q9UMS0 254 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 SSX2IPQ9Y2D8 614 aa23.78■■□□□ 1.4
LIMD2-205ENST00000578402 SYNJ2BP-COX16A0A087WUM0 186 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 A0A1W2PQH9 124 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 DAPK3O43293 454 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 SEC31AO94979 1220 aaKnown RBP23.77■■□□□ 1.4
LIMD2-205ENST00000578402 RPL17P18621 184 aaKnown RBP23.77■■□□□ 1.4
LIMD2-205ENST00000578402 ARL4AP40617 200 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 DYNLT1P63172 113 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 OTUD4Q01804 1114 aaKnown RBP23.77■■□□□ 1.4
LIMD2-205ENST00000578402 RAB33AQ14088 237 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 MSANTD2Q6P1R3 559 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 HERC6Q8IVU3 1022 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 VPS52Q8N1B4 723 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 PCDH19Q8TAB3 1148 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 CCHCR1Q8TD31 782 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 RAD9AQ99638 391 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 TTLL2Q9BWV7 592 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 NMUR1Q9HB89 426 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 COX16Q9P0S2 106 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 FNIP2Q9P278 1114 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 NEU2Q9Y3R4 380 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 SLC4A7Q9Y6M7 1214 aa23.77■■□□□ 1.4
LIMD2-205ENST00000578402 C2CD2LO14523 706 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 APOL1O14791 398 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 IRAK2O43187 625 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 ATF2P15336 505 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 ECHS1P30084 290 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 USP46P62068 366 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 GSPT2Q8IYD1 628 aaKnown RBP23.76■■□□□ 1.39
LIMD2-205ENST00000578402 PQLC3Q8N755 202 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 ADAM32Q8TC27 787 aa23.76■■□□□ 1.39
LIMD2-205ENST00000578402 RNF139Q8WU17 664 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms