RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 ZNF217O75362 1048 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 IRF1P10914 325 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 CD59P13987 128 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 GNSP15586 552 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 GABRG2P18507 467 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 WARSP23381 471 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 NTSR1P30989 418 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 TXLNAP40222 546 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 NOP14P78316 857 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 SURF1Q15526 300 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 C10orf76Q5T2E6 689 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 HECTD3Q5T447 861 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 CHPFQ8IZ52 775 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 NUP93Q8N1F7 819 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 KIAA1958Q8N8K9 716 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 OR5B17Q8NGF7 314 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 SCFD1Q8WVM8 642 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 HNRNPLLQ8WVV9 542 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 KBTBD7Q8WVZ9 684 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 FBXO32Q969P5 355 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 HSPA12BQ96MM6 686 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 MRPL45Q9BRJ2 306 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 MED10Q9BTT4 135 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 TTLL2Q9BWV7 592 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 PANK2Q9BZ23 570 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 FAM124BQ9H5Z6 455 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 CCDC86Q9H6F5 360 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 RAB6BQ9NRW1 208 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 PANK4Q9NVE7 773 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 CALCOCO1Q9P1Z2 691 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 KLF15Q9UIH9 416 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 APOBEC2Q9Y235 224 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 GREB1Q4ZG55 1949 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 WDR87Q6ZQQ6 2873 aa7.28□□□□□ -1.24
SMARCE1-212ENST00000577721 MAP1BP46821 2468 aaKnown RBP7.27□□□□□ -1.24
SMARCE1-212ENST00000577721 CITO14578 2027 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 IGHV1OR15-9A0A0B4J2B8 117 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 A0A1W2PQD8 194 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 FAM221BA6H8Z2 402 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 A8MXQ7 604 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 COCHO43405 550 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TULP3O75386 442 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 RTN3O95197 1032 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 OAS1P00973 400 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 FTH1P19P0C7X4 201 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 DLATP10515 647 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TNNI1P19237 187 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 MAOBP27338 520 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 CASP5P51878 434 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TNNC1P63316 161 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 SLC14A1Q13336 389 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TRPC3Q13507 836 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 ALCAMQ13740 583 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 COL28A1Q2UY09 1125 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 C4orf17Q53FE4 359 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 WDR45BQ5MNZ6 344 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 GRAMD4Q6IC98 578 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 KIAA1324Q6UXG2 1013 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 STXBP4Q6ZWJ1 553 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 USP49Q70CQ1 688 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TRAPPC11Q7Z392 1133 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 RAB44Q7Z6P3 723 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 PDZD3Q86UT5 571 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 PROSER1Q86XN7 944 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TMEM25Q86YD3 366 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 CCDC65Q8IXS2 484 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 PDZD8Q8NEN9 1154 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 CXorf38Q8TB03 319 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 IPO4Q8TEX9 1081 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 SETD7Q8WTS6 366 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 OTUB2Q96DC9 234 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 TMX3Q96JJ7 454 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 XPO6Q96QU8 1125 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 STRA6Q9BX79 667 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 ZNF518BQ9C0D4 1074 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 ELOVL4Q9GZR5 314 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 MIR1-1HGQ9H1L0 117 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 CAPN10Q9HC96 672 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 SPHK2Q9NRA0 654 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 DNAJC17Q9NVM6 304 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 DNAAF2Q9NVR5 837 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 PPP4R2Q9NY27 417 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 SUSD2Q9UGT4 822 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 NUP210Q8TEM1 1887 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 ATP8B3O60423 1300 aa7.27□□□□□ -1.25
SMARCE1-212ENST00000577721 CACNA1GO43497 2377 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 MEI4A8MW99 385 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 C9orf172C9J069 976 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 NEDD8-MDP1E9PL57 170 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 KIAA0391O15091 583 aaKnown RBP7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 TRIM24O15164 1050 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 HOXC11O43248 304 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 PHACTR2O75167 634 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 OLFM2O95897 454 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 CST3P01034 146 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 STAT6P42226 847 aa7.26□□□□□ -1.25
SMARCE1-212ENST00000577721 CACNA2D1P54289 1103 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms