RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NDST1P52848 882 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 CLDN10P78369 228 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 KNOP1Q1ED39 458 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 SGSM1Q2NKQ1 1148 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 C10orf120Q5SQS8 335 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 DCAF12L1Q5VU92 463 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 MDM1Q8TC05 714 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PARD3BQ8TEW8 1205 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 TAF4BQ92750 862 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 CDK5RAP1Q96SZ6 601 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 CDC6Q99741 560 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 MKRN2Q9H000 416 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PNPLA8Q9NP80 782 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 TM7SF3Q9NS93 570 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 FAM49BQ9NUQ9 324 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PLK2Q9NYY3 685 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PTPRBP23467 1997 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PLXNB3Q9ULL4 1909 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 SPTLC2O15270 562 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 FLRT2O43155 660 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 PPP6R2O75170 966 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 CILPO75339 1184 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 C4BPAP04003 597 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 RPN1P04843 607 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 RARGP13631 454 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 ACO1P21399 889 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 ADORA2BP29275 332 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 MFAP3P55082 362 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 EHHADHQ08426 723 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 ORC1Q13415 861 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 EIF4HQ15056 248 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 SOWAHCQ53LP3 525 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 Q6ZNB5 142 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 CLEC20AQ6ZU45 233 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 GPRIN1Q7Z2K8 1008 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 SLCO6A1Q86UG4 719 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 TMPRSS6Q8IU80 811 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 C12orf29Q8N999 325 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 LINC00301Q8NCQ3 95 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 SIPA1Q96FS4 1042 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 PCED1AQ9H1Q7 454 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 SLC39A2Q9NP94 309 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 OSER1Q9NX31 292 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 THAP10Q9P2Z0 257 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 HMGXB4Q9UGU5 601 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 FBXO10Q9UK96 956 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 PCDHGB2Q9Y5G2 931 aa12.25□□□□□ -0.45
CTDNEP1-212ENST00000576613 PVALEFA0A1B0GWK0 134 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 A0A1W2PQH9 124 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 METTL12A8MUP2 240 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 KCNJ18B7U540 433 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 MDM4O15151 490 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 STC2O76061 302 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 VNN1O95497 513 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 PENKP01210 267 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 IGLV3-19P01714 112 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 CYBBP04839 570 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 RALAP11233 206 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 IL12RB1P42701 662 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 AFF3P51826 1226 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 COG7P83436 770 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 ENPP2Q13822 863 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 SUZ12Q15022 739 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 GEN1Q17RS7 908 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 HLA-BQ31612 363 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZACNQ401N2 412 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 TMPRSS7Q7RTY8 843 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 ANKS1BQ7Z6G8 1248 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 GALNT15Q8N3T1 639 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZNF276Q8N554 614 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 PLEKHO2Q8TD55 490 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 RHBDD1Q8TEB9 315 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 ELMO3Q96BJ8 720 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 CYFIP2Q96F07 1278 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 HNRNPABQ99729 332 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 IMPG2Q9BZV3 1241 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 NMUR1Q9HB89 426 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 IL21RQ9HBE5 538 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 CELSR3Q9NYQ7 3312 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 CLIC5Q9NZA1 410 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 DKK4Q9UBT3 224 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 EIF2B4Q9UI10 523 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 NUDT5Q9UKK9 219 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 MTMR6Q9Y217 621 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 FNDC3AQ9Y2H6 1198 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 RAXQ9Y2V3 346 aa12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 SMG1Q96Q15 3661 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-212ENST00000576613 ACACAQ13085 2346 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 HHLA1C9JL84 531 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 CUTAO60888 179 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms