RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 NEDD8-MDP1E9PL57 170 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 TRIM24O15164 1050 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 GREM1O60565 184 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 CER1O95813 267 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 SYT1P21579 422 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 OXTRP30559 389 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 ATP5C1P36542 298 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 DGKGP49619 791 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 SLC5A3P53794 718 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 STARD3Q14849 445 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 DBX2Q6ZNG2 339 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 SLCO6A1Q86UG4 719 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 CCDC127Q96BQ5 260 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 SMARCD1Q96GM5 515 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 USP28Q96RU2 1077 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 KLF16Q9BXK1 252 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 XYLT2Q9H1B5 865 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 KCNF1Q9H3M0 494 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 VRTNQ9H8Y1 702 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 TLR8Q9NR97 1041 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 AGPAT3Q9NRZ7 376 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 WSB2Q9NYS7 404 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 GMIPQ9P107 970 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 LSM7Q9UK45 103 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 UBE4BO95155 1302 aa11.3□□□□□ -0.6
CALCOCO2-228ENST00000576582 KNL1Q8NG31 2342 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 EIF4E1BA6NMX2 242 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 MEI4A8MW99 385 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 TLR5O60602 858 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 DKK1O94907 266 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 MAOBP27338 520 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 MYL6P60660 151 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 EHHADHQ08426 723 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 TERF2Q15554 542 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 KLHDC10Q6PID8 442 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 PAQR9Q6ZVX9 377 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 GALNT15Q8N3T1 639 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 MDM1Q8TC05 714 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 TOE1Q96GM8 510 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 GAREM1Q9H706 876 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 PRDM16Q9HAZ2 1276 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 CACNA2D2Q9NY47 1150 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 FBXO10Q9UK96 956 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 SLC27A6Q9Y2P4 619 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 RAXQ9Y2V3 346 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 RAD54BQ9Y620 910 aa11.29□□□□□ -0.6
CALCOCO2-228ENST00000576582 METTL12A8MUP2 240 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 WASH3PC4AMC7 463 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 TULP2O00295 520 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 BCAT2O15382 392 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 FLRT2O43155 660 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 PHACTR2O75167 634 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 AP1G2O75843 785 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 IRF1P10914 325 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 NCAM1P13591 858 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 MATKP42679 507 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 PLA2G4AP47712 749 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 AP3M2P53677 418 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 AMPD3Q01432 767 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 CEBPZQ03701 1054 aaKnown RBP11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 HLA-BQ31612 363 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 PDILTQ8N807 584 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 XXYLT1Q8NBI6 393 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 KIF18AQ8NI77 898 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 HPS3Q969F9 1004 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 WBP2Q969T9 261 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 NUP58Q9BVL2 599 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 GPR174Q9BXC1 333 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 PCED1AQ9H1Q7 454 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 CSNK1G1Q9HCP0 422 aa11.28□□□□□ -0.6
CALCOCO2-228ENST00000576582 TM7SF3Q9NS93 570 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms