RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 IARS2Q9NSE4 1012 aaKnown RBP13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 WDR27A2RRH5 827 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 DLGAP3O95886 979 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 ITGB3P05106 788 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP4X1Q8N118 509 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 FBXW8Q8N3Y1 598 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 C12orf50Q8NA57 414 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 GMCL1P1Q8NEA9 526 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 IPMKQ8NFU5 416 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CALML6Q8TD86 181 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 ITGB1BP2Q9UKP3 347 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CASZ1Q86V15 1759 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 VDRP11473 427 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 VCLP18206 1134 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 MIPP30301 263 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 TSTA3Q13630 321 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 XRRA1Q6P2D8 792 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 WDR41Q9HAD4 459 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 WASF2Q9Y6W5 498 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 A0A096LPK6 155 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 TMEM150BA6NC51 233 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 MEIS2O14770 477 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 WDR4P57081 412 aaKnown RBP13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 TTC7BQ86TV6 843 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 MAP4K3Q8IVH8 894 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 COLGALT1Q8NBJ5 622 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 OR9Q1Q8NGQ5 310 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 SEPT1Q8WYJ6 367 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 TUBGCP3Q96CW5 907 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP4F12Q9HCS2 524 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CHST12Q9NRB3 414 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 TAS2R1Q9NYW7 299 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 COPG2Q9UBF2 871 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CROTQ9UKG9 612 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 ATP8B3O60423 1300 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 TCRBV9S1A1TA0A576 114 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 ADCY6O43306 1168 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 ICAM1P05362 532 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP3A4P08684 503 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 NAMPTP43490 491 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 GALK1P51570 392 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 RAP1GDS1P52306 607 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC103Q8IW40 242 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC126Q96EE4 140 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 ATAD3AQ9NVI7 634 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 VTI1BQ9UEU0 232 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 DMTF1Q9Y222 760 aa13.49□□□□□ -0.25
PCDHGB3-201ENST00000576222 NFIBO00712 420 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 TGDSO95455 350 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 FCGR1AP12314 374 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 RBL1P28749 1068 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 PTPN11Q06124 597 aaPredicted RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 Q3C1V9 767 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 FUT11Q495W5 492 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 GPRASP2Q96D09 838 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 C12orf65Q9H3J6 166 aaKnown RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 E5RI56 91 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 CHADO15335 359 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCNB1P14635 433 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 ACADSBP45954 432 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 HIRAP54198 1017 aaPredicted RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 NME5P56597 212 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 IER5Q5VY09 327 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 EGFL6Q8IUX8 553 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 AGO4Q9HCK5 861 aaKnown RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 hCG_1818297A0A087WSY0 165 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 CAPN8A6NHC0 703 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 ADAMTS3O15072 1205 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 MOCS2O96007 188 aaPredicted RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 PPARGP37231 505 aaPredicted RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 PSEN1P49768 467 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 TRAF2Q12933 501 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 GLMNQ92990 594 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 SPATA33Q96N06 139 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 DDHD2O94830 711 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 MT-CO1P00395 513 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 MPOP05164 745 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP2F1P24903 491 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 TTKP33981 857 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 RTP1P59025 263 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 RPL7AP62424 266 aaKnown RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 GRTP1Q5TC63 336 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZNF554Q86TJ5 538 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 WDR49Q8IV35 697 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZNF560Q96MR9 790 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 KREMEN1Q96MU8 473 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 HSD17B14Q9BPX1 270 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 APOL2Q9BQE5 337 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms