RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 ANAPC1Q9H1A4 1944 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 SLC12A8A0AV02 714 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 ANKRD62A6NC57 917 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 C19orf67A6NJJ6 358 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 HEPACAM2A8MVW5 462 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 EIF3CLB5ME19 914 aaKnown RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 ANHXE9PGG2 379 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 LEFTY2O00292 366 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 DPYSL4O14531 572 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 NDUFA10O95299 355 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 HMBSP08397 361 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 MYBL1P10243 752 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 IRF1P10914 325 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 TFE3P19532 575 aaPredicted RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 RFC1P35251 1148 aaPredicted RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 MATKP42679 507 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 MAGEA1P43355 309 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 RPL7AP62424 266 aaKnown RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 GPC5P78333 572 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 MAMLD1Q13495 774 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 HTR4Q13639 388 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 ZNF77Q15935 545 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 PPP1R15BQ5SWA1 713 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 VITQ6UXI7 678 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 MTSS1LQ765P7 747 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 ARCQ7LC44 396 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 TAC4Q86UU9 113 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 MIB1Q86YT6 1006 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 CELF5Q8N6W0 485 aaKnown RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 TTC16Q8NEE8 873 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 ADAM32Q8TC27 787 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 SH3RF2Q8TEC5 729 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 RXFP2Q8WXD0 754 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 ELSPBP1Q96BH3 223 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 TRIM11Q96F44 468 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 MCEEQ96PE7 176 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 NPY6RQ99463 290 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 EIF3CQ99613 913 aaKnown RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 KXD1Q9BQD3 176 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 DDX23Q9BUQ8 820 aaKnown RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 PARVAQ9NVD7 372 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 REXO2Q9Y3B8 237 aaKnown RBP8.94□□□□□ -0.98
NUP88-211ENST00000575976 NUMBLQ9Y6R0 609 aa8.94□□□□□ -0.98
NUP88-211ENST00000575976 DENND4CQ5VZ89 1909 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 C2CD4BA6NLJ0 364 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 M0QYT0 321 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SCAMP3O14828 347 aaKnown RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 IRAK2O43187 625 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 MSI1O43347 362 aaKnown RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 ECI2O75521 394 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TRUB2O95900 331 aaKnown RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 IGLV3-25P01717 112 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CYP1A2P05177 515 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 PTMAP06454 111 aaKnown RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 ASGR2P07307 311 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TMEM253P0C7T8 217 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TCF3P15923 654 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 PDGFRAP16234 1089 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 GPD1P21695 349 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SULT1E1P49888 294 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 COG7P83436 770 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CCZ1BP86790 482 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CCZ1P86791 482 aaPredicted RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 OGDHQ02218 1023 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 USP4Q13107 963 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 EIF4EBP2Q13542 120 aaPredicted RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 GRM2Q14416 872 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SPA17Q15506 151 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TRIP4Q15650 581 aaPredicted RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 CCDC14Q49A88 953 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 C10orf76Q5T2E6 689 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 OTUD1Q5VV17 481 aaPredicted RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 DCUN1D2Q6PH85 259 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 ACRBPQ8NEB7 543 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CCDC112Q8NEF3 446 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 BPIFB1Q8TDL5 484 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CTNNBL1Q8WYA6 563 aaPredicted RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 NT5C3BQ969T7 300 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 E2F7Q96AV8 911 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CFAP57Q96MR6 1250 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SERPINB11Q96P15 392 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 PPP1R9BQ96SB3 815 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TBCBQ99426 244 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 ADAM33Q9BZ11 813 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TRIM7Q9C029 511 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SMOC2Q9H3U7 446 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 KIF9Q9HAQ2 790 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 KCNK12Q9HB15 430 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 MRPL47Q9HD33 250 aaKnown RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 OBP2AQ9NY56 170 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CALCOCO1Q9P1Z2 691 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 CFAP97Q9P2B7 532 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 IGSF9Q9P2J2 1179 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 STAP1Q9ULZ2 295 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 TFR2Q9UP52 801 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 HBS1LQ9Y450 684 aaKnown RBP8.93□□□□□ -0.98
NUP88-211ENST00000575976 PCDHA13Q9Y5I0 950 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 DOCK8Q8NF50 2099 aa8.93□□□□□ -0.98
NUP88-211ENST00000575976 SYNJ2BP-COX16A0A087WUM0 186 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms