RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 GTSE1Q9NYZ3 720 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 COX16Q9P0S2 106 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 LSM7Q9UK45 103 aaKnown RBP16.97■□□□□ 0.31
PFN1-203ENST00000574872 ARNTLO00327 626 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 GREM1O60565 184 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 RTN2O75298 545 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 TRUB2O95900 331 aaKnown RBP16.96■□□□□ 0.31
PFN1-203ENST00000574872 GZMAP12544 262 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 ALADP13716 330 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 RRM1P23921 792 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 CORO1AP31146 461 aaKnown RBP16.96■□□□□ 0.31
PFN1-203ENST00000574872 FLT3P36888 993 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 SCNN1AP37088 669 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 CDK17Q00537 523 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 PFKPQ01813 784 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 GFPT1Q06210 699 aaPredicted RBP16.96■□□□□ 0.31
PFN1-203ENST00000574872 TRNP1Q6NT89 227 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 DNAJC24Q6P3W2 148 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 BEND5Q7L4P6 421 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 CSGALNACT1Q8TDX6 532 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 EDAQ92838 391 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 SERPINB11Q96P15 392 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 FAM83CQ9BQN1 747 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 SELENOOQ9BVL4 669 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 HPS4Q9NQG7 708 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 HEBP1Q9NRV9 189 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.96■□□□□ 0.31
PFN1-203ENST00000574872 WDR35Q9P2L0 1181 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 TMEM59LQ9UK28 342 aa16.96■□□□□ 0.31
PFN1-203ENST00000574872 HBS1LQ9Y450 684 aaKnown RBP16.96■□□□□ 0.31
PFN1-203ENST00000574872 E2F8A0AVK6 867 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 PI4K2BG5E9Z4 385 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 KLKB1P03952 638 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 TFE3P19532 575 aaPredicted RBP16.95■□□□□ 0.3
PFN1-203ENST00000574872 ABCB4P21439 1286 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 NOS2P35228 1153 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 MATKP42679 507 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 SOX9P48436 509 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 SULT1E1P49888 294 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 TBX4P57082 545 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
PFN1-203ENST00000574872 PDGFRLQ15198 375 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 TRIP4Q15650 581 aaPredicted RBP16.95■□□□□ 0.3
PFN1-203ENST00000574872 EML3Q32P44 896 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 CCDC122Q5T0U0 273 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 PPP1R2P3Q6NXS1 205 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 DENND1CQ8IV53 801 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 C3orf20Q8ND61 904 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 JOSD2Q8TAC2 188 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 DNASE1L2Q92874 299 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 ZNF653Q96CK0 615 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 NHEJ1Q9H9Q4 299 aaPredicted RBP16.95■□□□□ 0.3
PFN1-203ENST00000574872 DDIT4Q9NX09 232 aa16.95■□□□□ 0.3
PFN1-203ENST00000574872 KIF26AQ9ULI4 1882 aaPredicted RBP16.95■□□□□ 0.3
PFN1-203ENST00000574872 TICRRQ7Z2Z1 1910 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 SSU72P8A0A1W2PR75 194 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 OTOL1A6NHN0 477 aaPredicted RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 SLC9A3R1O14745 358 aaPredicted RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 IRAK2O43187 625 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 AKR1B10O60218 316 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 KRT3P12035 628 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 KPNA1P52294 538 aaPredicted RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 VCPP55072 806 aaKnown RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 GSCP56915 257 aaPredicted RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 SIGLEC14Q08ET2 396 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 NME3Q13232 169 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 OTUD1Q5VV17 481 aaPredicted RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 Q6ZNB5 142 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 SIX5Q8N196 739 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 ATP2A3Q93084 1043 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 CCDC42Q96M95 316 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 CFAP57Q96MR6 1250 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 MCEEQ96PE7 176 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 ADAM33Q9BZ11 813 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 ARHGEF3Q9NR81 526 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 SPTLC3Q9NUV7 552 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 CALCOCO1Q9P1Z2 691 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 TBC1D14Q9P2M4 693 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 MYO1AQ9UBC5 1043 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 AGO1Q9UL18 857 aaKnown RBP16.94■□□□□ 0.3
PFN1-203ENST00000574872 STAP1Q9ULZ2 295 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 COL4A3Q01955 1670 aa16.94■□□□□ 0.3
PFN1-203ENST00000574872 TCRBV5S1A1TA0A578 114 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 KRBA1A5PL33 1030 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 M0QYT0 321 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 MOCS2O96007 188 aaPredicted RBP16.93■□□□□ 0.3
PFN1-203ENST00000574872 IGLV3-25P01717 112 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 RUNX3Q13761 415 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 ASTE1Q2TB18 679 aaPredicted RBP16.93■□□□□ 0.3
PFN1-203ENST00000574872 ITPRIPL2Q3MIP1 535 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 SLC44A4Q53GD3 710 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
PFN1-203ENST00000574872 TRIM67Q6ZTA4 783 aa16.93■□□□□ 0.3
PFN1-203ENST00000574872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
PFN1-203ENST00000574872 CPA6Q8N4T0 437 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms