RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PRLRP16471 622 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 GABRR2P28476 465 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 TCEAL5Q5H9L2 206 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 HSPH1Q92598 858 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 CAPZA3Q96KX2 299 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 CDCA3Q99618 268 aaPredicted RBP25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 WDR6Q9NNW5 1121 aaKnown RBP25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 ASAH2Q9NR71 780 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 IRAK2O43187 625 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 KRT1P04264 644 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 KRT7P08729 469 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 RARAP10276 462 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 KCNC3Q14003 757 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 AADACL2Q6P093 401 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 ELMSAN1Q6PJG2 1045 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 GAREM2Q75VX8 874 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 MIB1Q86YT6 1006 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 KATNAL2Q8IYT4 538 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 OLA1Q9NTK5 396 aaKnown RBP25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 GPATCH2LQ9NWQ4 482 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 ZDHHC7Q9NXF8 308 aa25.02■■□□□ 1.6
ATPAF1-213ENST00000574428 C2orf78A6NCI8 922 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 PI4K2BG5E9Z4 385 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 F9P00740 461 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 PYGMP11217 842 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 MYL4P12829 197 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 GBP1P32455 592 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 PPP3CCP48454 512 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 HYAL1Q12794 435 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 HECTD3Q5T447 861 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 C12orf76Q8N812 135 aaPredicted RBP25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 MS4A14Q96JA4 679 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 SNRNP25Q9BV90 132 aaKnown RBP25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 CARD9Q9H257 536 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 TMPRSS4Q9NRS4 437 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 MARCH2Q9P0N8 246 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 RASAL2Q9UJF2 1139 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 MRFAP1Q9Y605 127 aa25.01■■□□□ 1.59
ATPAF1-213ENST00000574428 CCDC195A0A1B0GUA6 201 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 SOX1O00570 391 aaPredicted RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 NRG2O14511 850 aaPredicted RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 XYLBO75191 536 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 GRIN2CQ14957 1233 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 SND1Q7KZF4 910 aaKnown RBP eCLIP25■■□□□ 1.59
ATPAF1-213ENST00000574428 SERPINB11Q96P15 392 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 PRKD2Q9BZL6 878 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 DNMT3BQ9UBC3 853 aaKnown RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 CDC23Q9UJX2 597 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 MYO9BQ13459 2157 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 DYNC1I1O14576 645 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 CTIFO43310 598 aaKnown RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 COCHO43405 550 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 CEP104O60308 925 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 CXCR3P49682 368 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 CYP4F8P98187 520 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 EIF4EBP2Q13542 120 aaPredicted RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 PABPC1LQ4VXU2 614 aaKnown RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 RAPGEF5Q92565 580 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 RNF34Q969K3 372 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 RNF25Q96BH1 459 aaPredicted RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 ZNF707Q96C28 371 aaPredicted RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 PBKQ96KB5 322 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 CDK5RAP1Q96SZ6 601 aaKnown RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 NACA2Q9H009 215 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 TRPC7Q9HCX4 862 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 ANLNQ9NQW6 1124 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 DDX56Q9NY93 547 aaKnown RBP25■■□□□ 1.59
ATPAF1-213ENST00000574428 SMARCAL1Q9NZC9 954 aa25■■□□□ 1.59
ATPAF1-213ENST00000574428 OBSL1O75147 1896 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 A0A1W2PRU2 124 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 LINC01565O15544 149 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 GJA1P17302 382 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 PTPN2P17706 415 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 LLGL1Q15334 1064 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 BOLA3Q53S33 107 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 ZC3H12AQ5D1E8 599 aaKnown RBP24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 CREG2Q8IUH2 290 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 CCDC50Q8IVM0 306 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 EXD1Q8NHP7 514 aa24.99■■□□□ 1.59
ATPAF1-213ENST00000574428 TMEM265A0A087WTH1 108 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 LRRD1A4D1F6 860 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 GLP2RO95838 553 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 OAS1P00973 400 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ATP5C1P36542 298 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 CCR2P41597 374 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TUBP50607 506 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 CA9Q16790 459 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ODF2Q5BJF6 829 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ERMARDQ5T6L9 678 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TADA2BQ86TJ2 420 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ZNF276Q8N554 614 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TEKT4Q8WW24 435 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TSC1Q92574 1164 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 MAGEB5Q9BZ81 275 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ATXN3LQ9H3M9 355 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 WDCPQ9H6R7 721 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 DNMT3LQ9UJW3 386 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 FZD10Q9ULW2 581 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 AP4E1Q9UPM8 1137 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms