RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 FAM124BQ9H5Z6 455 aaPredicted RBP22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 MARCH2Q9P0N8 246 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 STRIP2Q9ULQ0 834 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 ZNF510Q9Y2H8 683 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 STARD13Q9Y3M8 1113 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 CEP295Q9C0D2 2601 aa22.18■■□□□ 1.14
CHRNB1-206ENST00000574054 GABRG2P18507 467 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 PTGER3P43115 390 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 TKTL1P51854 596 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 YWHAGP61981 247 aaKnown RBP eCLIP22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 YWHAEP62258 255 aaKnown RBP22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 LRRC63Q05C16 580 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 LRMPQ12912 555 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 STIM1Q13586 685 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 SGO2Q562F6 1265 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 N4BP2L1Q5TBK1 243 aaPredicted RBP22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 ISM2Q6H9L7 571 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 DCLK3Q9C098 648 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 CALCOCO1Q9P1Z2 691 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 HESX1Q9UBX0 185 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 COQ4Q9Y3A0 265 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 CACNA1BQ00975 2339 aa22.17■■□□□ 1.14
CHRNB1-206ENST00000574054 A0A1W2PQF6 199 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 SLC12A8A0AV02 714 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 TULP2O00295 520 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 PSMA7O14818 248 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 ZBED1O96006 694 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 CISD3P0C7P0 127 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 BCAT1P54687 386 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 RAB41Q5JT25 222 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 DAB2IPQ5VWQ8 1189 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 LYSMD4Q5XG99 296 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 SPATA20Q8TB22 786 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 ULBP1Q9BZM6 244 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 TMEM9BQ9NQ34 198 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 CACNA2D2Q9NY47 1150 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 TSPAN16Q9UKR8 245 aa22.16■■□□□ 1.14
CHRNB1-206ENST00000574054 ATXN2Q99700 1313 aaKnown RBP22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 CHKAP35790 457 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 IRX4P78413 519 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 RPL6Q02878 288 aaKnown RBP22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 PDE4CQ08493 712 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 TRIM61Q5EBN2 209 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 KIAA1211LQ6NV74 962 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 DENND1CQ8IV53 801 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 DEFB119Q8N690 84 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 IPO4Q8TEX9 1081 aaKnown RBP22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 NDRG1Q92597 394 aaKnown RBP22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 SLC35C1Q96A29 364 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 P2RY11Q96G91 374 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 TIGD1Q96MW7 591 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 IPO9Q96P70 1041 aaKnown RBP22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 LRRC4Q9HBW1 653 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 AGO1Q9UL18 857 aaKnown RBP22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 RAD54BQ9Y620 910 aa22.15■■□□□ 1.14
CHRNB1-206ENST00000574054 XPO1O14980 1071 aaKnown RBP22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 AP5Z1O43299 807 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 KCNK5O95279 499 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 NDUFV2P19404 249 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 ADIGQ0VDE8 80 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 BST2Q10589 180 aaKnown RBP22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 CCDC40Q4G0X9 1142 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 KLHL10Q6JEL2 608 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 PSAPL1Q6NUJ1 521 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 SYT12Q8IV01 421 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 UBA3Q8TBC4 463 aa22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 NUSAP1Q9BXS6 441 aaKnown RBP22.14■■□□□ 1.13
CHRNB1-206ENST00000574054 PENKP01210 267 aaPredicted RBP22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 CYBBP04839 570 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 ITPKAP23677 461 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 TBXAS1P24557 533 aaPredicted RBP22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 FMO5P49326 533 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 NOVA1P51513 510 aaKnown RBP22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 UAP1L1Q3KQV9 507 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 SPDYCQ5MJ68 293 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 FYB2Q5VWT5 728 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 SLC36A4Q6YBV0 504 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 SIX6OS1Q8N1H7 587 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 GABRG3Q99928 467 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 METTL14Q9HCE5 456 aaKnown RBP22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 TMEM74BQ9NUR3 256 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 EVLQ9UI08 416 aaPredicted RBP22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 FBXO10Q9UK96 956 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 MAN1B1Q9UKM7 699 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 CYP8B1Q9UNU6 501 aa22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 MAP1BP46821 2468 aaKnown RBP22.13■■□□□ 1.13
CHRNB1-206ENST00000574054 WASH3PC4AMC7 463 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 CFIP05156 583 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 VDRP11473 427 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 PM20D1Q6GTS8 502 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 KIAA1324Q6UXG2 1013 aaKnown RBP22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 RNF139Q8WU17 664 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 PLD4Q96BZ4 506 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 DHTKD1Q96HY7 919 aaPredicted RBP22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 CEP63Q96MT8 703 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 SLC6A17Q9H1V8 727 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 OLA1Q9NTK5 396 aaKnown RBP22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 ANGPTL2Q9UKU9 493 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 SLC27A6Q9Y2P4 619 aa22.12■■□□□ 1.13
CHRNB1-206ENST00000574054 IGHV1OR15-9A0A0B4J2B8 117 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms