RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 MDH1BQ5I0G3 518 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 KLHDC10Q6PID8 442 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 ZNF248Q8NDW4 579 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 TSC1Q92574 1164 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 MTMR12Q9C0I1 747 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 CCSER2Q9H7U1 834 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 CYLDQ9NQC7 956 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 TMEM30AQ9NV96 361 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 INTS13Q9NVM9 706 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
CHMP6-203ENST00000572525 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 VWA3AA6NCI4 1184 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 H0Y8X5 98 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 VILLO15195 856 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 SYNCRIPO60506 623 aaKnown RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 TLR5O60602 858 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 TSPAN3O60637 253 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 STAU1O95793 577 aaKnown RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 PENKP01210 267 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 KRT18P05783 430 aaKnown RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 PDGFRBP09619 1106 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 PTPN1P18031 435 aaKnown RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 GNL1P36915 607 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 CSRP3P50461 194 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 CACNA2D1P54289 1103 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 TMPRSS3P57727 454 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 CXADRP78310 365 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 ZBTB16Q05516 673 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 GRIN1Q05586 938 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 PDE4CQ08493 712 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 TARDBPQ13148 414 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 CAMK2GQ13555 558 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 HES3Q5TGS1 186 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 Q6ZNB5 142 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 HS2ST1Q7LGA3 356 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 ZNF276Q8N554 614 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 KRI1Q8N9T8 703 aaKnown RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 RBBP8NLQ8NC74 664 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 LARP4BQ92615 738 aaKnown RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 RAD54LQ92698 747 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 WBP2Q969T9 261 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 PLIN2Q99541 437 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 FBXO44Q9H4M3 255 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
CHMP6-203ENST00000572525 OLFML3Q9NRN5 406 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 DOCK9Q9BZ29 2069 aa10.7□□□□□ -0.7
CHMP6-203ENST00000572525 TDRD6O60522 2096 aaKnown RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 PTPRJQ12913 1337 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 BRINP1O60477 761 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 LDOC1O95751 146 aaPredicted RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 TNNC2P02585 160 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 CLCN1P35523 988 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 UBA7P41226 1012 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 SLC5A3P53794 718 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 MFAP3P55082 362 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 CDH8P55286 799 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 RACK1P63244 317 aaKnown RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 DUOXA2Q1HG44 320 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 BROXQ5VW32 411 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 CCDC83Q8IWF9 413 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 DCBLD1Q8N8Z6 715 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 FAM181AQ8N9Y4 354 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 B3GALNT2Q8NCR0 500 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 OR2T3Q8NH03 318 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 TTC9Q92623 222 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 SKA1Q96BD8 255 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 MED8Q96G25 268 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 CNDP2Q96KP4 475 aaKnown RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 ZNF578Q96N58 590 aaPredicted RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 ACCSQ96QU6 501 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 ELF4Q99607 663 aaPredicted RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 NACA2Q9H009 215 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 SNX25Q9H3E2 840 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 PDE11AQ9HCR9 933 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 TLR8Q9NR97 1041 aaKnown RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 ZNF510Q9Y2H8 683 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 NME7Q9Y5B8 376 aa10.69□□□□□ -0.7
CHMP6-203ENST00000572525 SPTBN1Q01082 2364 aaKnown RBP10.69□□□□□ -0.7
CHMP6-203ENST00000572525 TIMM44O43615 452 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 GAP43P17677 238 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 CHKAP35790 457 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ATP5C1P36542 298 aaKnown RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 NEK4P51957 841 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 BCAT1P54687 386 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 PCBP4P57723 403 aaKnown RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 IFRD2Q12894 506 aaPredicted RBP10.68□□□□□ -0.7
CHMP6-203ENST00000572525 MCM6Q14566 821 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ZNF234Q14588 700 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 SCARA3Q6AZY7 606 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 TPGS1Q6ZTW0 290 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 DYMQ7RTS9 669 aa10.68□□□□□ -0.7
CHMP6-203ENST00000572525 ANKS1BQ7Z6G8 1248 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms