RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
TOM1L1-213ENST00000572405 MFHAS1Q9Y4C4 1052 aa12.5□□□□□ -0.41
TOM1L1-213ENST00000572405 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 I6L893 689 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 SOAT2O75908 522 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 RBP3P10745 1247 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 CPB1P15086 417 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 CSF2RAP15509 400 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 ITIH2P19823 946 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 CHKAP35790 457 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 GPS1Q13098 491 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 NFE2Q16621 373 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 PRSS55Q6UWB4 352 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 TAC4Q86UU9 113 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 UNC45BQ8IWX7 931 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 LRRN4Q8WUT4 740 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 IRGQQ8WZA9 623 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 PWWP2AQ96N64 755 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 FRMD8P1Q9BZ68 369 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 PCDH9Q9HC56 1237 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 MED4Q9NPJ6 270 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 AAASQ9NRG9 546 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 ZNF638Q14966 1978 aaKnown RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 DGKIO75912 1065 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 DEFB103AP81534 67 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM43BQ6ZT52 329 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 VSIG1Q86XK7 387 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 GPR152Q8TDT2 470 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 FUBP3Q96I24 572 aaKnown RBP eCLIP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 EPB41L4BQ9H329 900 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 ETNK2Q9NVF9 386 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 ANAPC5Q9UJX4 755 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 PCDHB5Q9Y5E4 795 aa12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 COL4A4P53420 1690 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-213ENST00000572405 LTBP2Q14767 1821 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 OR6C75A6NL08 312 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 RNF40O75150 1001 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 TGM2P21980 687 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 AMPD1P23109 780 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ALDH7A1P49419 539 aaKnown RBP12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 PMS2P54278 862 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 GYS2P54840 703 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ROR1Q01973 937 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 GBE1Q04446 702 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ELAVL2Q12926 359 aaKnown RBP12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 MTMR3Q13615 1198 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 SCML4Q8N228 414 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 TAB3Q8N5C8 712 aaPredicted RBP12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 DQX1Q8TE96 717 aaKnown RBP12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 TTPALQ9BTX7 342 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ADAM7Q9H2U9 754 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 CWH43Q9H720 699 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ZNF487B1APH4 448 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 H7C0C1 242 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 CREB3O43889 395 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ARL4AP40617 200 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 ATP5OP48047 213 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 EFHC2Q5JST6 749 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 DARS2Q6PI48 645 aaKnown RBP12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 RNF19BQ6ZMZ0 732 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 CCHCR1Q8TD31 782 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 RNF139Q8WU17 664 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 SH3GL2Q99962 352 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 VN1R3Q9BXE9 311 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 CRISPLD1Q9H336 500 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 SEMA4AQ9H3S1 761 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 VPS18Q9P253 973 aa12.48□□□□□ -0.41
TOM1L1-213ENST00000572405 MTMR11A4FU01 709 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM72CH0Y354 149 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 H0YGN5 161 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 DNALI1O14645 258 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 VNN2O95498 520 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 TIMP1P01033 207 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 ACRP10323 421 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 RFC2P35250 354 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 ADRA1BP35368 520 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 USP46P62068 366 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM72AQ5TYM5 149 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 NCBP2-AS2Q69YL0 99 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM72DQ6L9T8 149 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 HIBCHQ6NVY1 386 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 SCD5Q86SK9 330 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 FAM72BQ86X60 149 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 NETO2Q8NC67 525 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 PGAP3Q96FM1 320 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 NMUR1Q9HB89 426 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 ARHGEF4Q9NR80 690 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 NUDT5Q9UKK9 219 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 SLC27A5Q9Y2P5 690 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 SNX10Q9Y5X0 201 aa12.47□□□□□ -0.41
TOM1L1-213ENST00000572405 NFS1Q9Y697 457 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms