RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 MSI1O43347 362 aaKnown RBP15.22■□□□□ 0.03
LITAF-208ENST00000571627 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
LITAF-208ENST00000571627 TYRP14679 529 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 GPD2P43304 727 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 DMC1Q14565 340 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 KRT31Q15323 416 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 EMC10Q5UCC4 262 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 DPY19L2P1Q6NXN4 242 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 DENND1CQ8IV53 801 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 FMNL3Q8IVF7 1028 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 SCML4Q8N228 414 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 DCLK2Q8N568 766 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 CCDC33Q8N5R6 958 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 RNF139Q8WU17 664 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 ZNF606Q8WXB4 792 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 ACDQ96AP0 544 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 HINFPQ9BQA5 517 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 EPC1Q9H2F5 836 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 ABCC13Q9NSE7 274 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 OLA1Q9NTK5 396 aaKnown RBP15.22■□□□□ 0.03
LITAF-208ENST00000571627 DNAJC17Q9NVM6 304 aaKnown RBP15.22■□□□□ 0.03
LITAF-208ENST00000571627 PLK2Q9NYY3 685 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 AGO1Q9UL18 857 aaKnown RBP15.22■□□□□ 0.03
LITAF-208ENST00000571627 DMXL1Q9Y485 3027 aa15.22■□□□□ 0.03
LITAF-208ENST00000571627 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.21■□□□□ 0.03
LITAF-208ENST00000571627 MED7O43513 233 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 HRO43593 1189 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 LTFP02788 710 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 CDK11BP21127 795 aaKnown RBP15.21■□□□□ 0.03
LITAF-208ENST00000571627 HOXA6P31267 233 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 TIE1P35590 1138 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 GRIA2P42262 883 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 KCNMA1Q12791 1236 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 FKBP15Q5T1M5 1219 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 PRR23BQ6ZRT6 265 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 SYT13Q7L8C5 426 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 WDR5BQ86VZ2 330 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 PASD1Q8IV76 773 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 SCUBE3Q8IX30 993 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 ALLCQ8N6M5 410 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 AOPEPQ8N6M6 819 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 HSFY1Q96LI6 401 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 VPS16Q9H269 839 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 MARK1Q9P0L2 795 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 DEC1Q9P2X7 70 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 TJP2Q9UDY2 1190 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 LIMA1Q9UHB6 759 aaKnown RBP15.21■□□□□ 0.03
LITAF-208ENST00000571627 FHOD1Q9Y613 1164 aa15.21■□□□□ 0.03
LITAF-208ENST00000571627 SDK1Q7Z5N4 2213 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 TBC1D3BA6NDS4 549 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 E5RJQ4 531 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
LITAF-208ENST00000571627 CACNG3O60359 315 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 FBXO21O94952 628 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 KLF8O95600 359 aaPredicted RBP15.2■□□□□ 0.02
LITAF-208ENST00000571627 ZNF165P49910 485 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 NCAPHQ15003 741 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 TRIP4Q15650 581 aaPredicted RBP15.2■□□□□ 0.02
LITAF-208ENST00000571627 C10orf76Q5T2E6 689 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 GRAMD4Q6IC98 578 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 MSANTD2Q6P1R3 559 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 TOGARAM2Q6ZUX3 1019 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 TERB1Q8NA31 727 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 IL17RCQ8NAC3 791 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 IRGQQ8WZA9 623 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 PLD4Q96BZ4 506 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 FUCA2Q9BTY2 467 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 LSM14BQ9BX40 385 aaKnown RBP15.2■□□□□ 0.02
LITAF-208ENST00000571627 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 WDR35Q9P2L0 1181 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 NCDNQ9UBB6 729 aa15.2■□□□□ 0.02
LITAF-208ENST00000571627 RALGAPA1Q6GYQ0 2036 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 A0A0A0MRY4 1105 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 SYCE3A1L190 88 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 PAPSS1O43252 624 aaPredicted RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 APBB3O95704 486 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 CAVIN2O95810 425 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 HNRNPLP14866 589 aaKnown RBP eCLIP15.19■□□□□ 0.02
LITAF-208ENST00000571627 ZNF18P17022 549 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 CLCN1P35523 988 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 KIR2DL1P43626 348 aaPredicted RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 RPL34P49207 117 aaKnown RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 MRPS21P82921 87 aaKnown RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 PDCLQ13371 301 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 SIM2Q14190 667 aaPredicted RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 MEA1Q16626 185 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 SLC47A2Q86VL8 602 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 TXNDC5Q8NBS9 432 aaKnown RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 CCDC26Q8TAB7 109 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 RUBCNQ92622 972 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 GOLGA1Q92805 767 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 FAM149B1Q96BN6 582 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 XPO6Q96QU8 1125 aaKnown RBP15.19■□□□□ 0.02
LITAF-208ENST00000571627 SLC4A5Q9BY07 1137 aa15.19■□□□□ 0.02
LITAF-208ENST00000571627 PLCB1Q9NQ66 1216 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms