RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CCDC195A0A1B0GUA6 201 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 KCNK3O14649 394 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 MSI1O43347 362 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 ENDOD1O94919 500 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 FGF19O95750 216 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 TBX18O95935 607 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 F9P00740 461 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 IGLV3-25P01717 112 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 KRT1P04264 644 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 KRT7P08729 469 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 PTPN2P17706 415 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 IL1R2P27930 398 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 TUBP50607 506 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 CYP4F8P98187 520 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 KCNC3Q14003 757 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 SMTNL2Q2TAL5 461 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 LRRC38Q5VT99 294 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 PAPD7Q5XG87 772 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 TXNRD3NBQ6F5E7 133 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 PDZD4Q76G19 769 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 POLNQ7Z5Q5 900 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 TMEM150AQ86TG1 271 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 SMG7Q92540 1137 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 RNF34Q969K3 372 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 ZNF707Q96C28 371 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 ACSF2Q96CM8 615 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 ATXN3LQ9H3M9 355 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 PIDD1Q9HB75 910 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 KLHL11Q9NVR0 708 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 PCDHA3Q9Y5H8 950 aa16.05■□□□□ 0.16
HERPUD1-219ENST00000570273 REV3LO60673 3130 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 LINC01565O15544 149 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 GLP2RO95838 553 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 RHOP08100 348 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 EPHA5P54756 1037 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 RWDD2BP57060 319 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 RARS2Q5T160 578 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 TMC5Q6UXY8 1006 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 GAREM2Q75VX8 874 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 Q7L0L9 218 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 MIB1Q86YT6 1006 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 LEMD2Q8NC56 503 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 HSPH1Q92598 858 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 ALG3Q92685 438 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 FAM161BQ96MY7 647 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 WDR6Q9NNW5 1121 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 DDX56Q9NY93 547 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 DNMT3BQ9UBC3 853 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 DNMT3LQ9UJW3 386 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 SAR1BQ9Y6B6 198 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 MTCH2Q9Y6C9 303 aa16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 MTCL1Q9Y4B5 1905 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-219ENST00000570273 A0A1W2PRU2 124 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 SLC12A8A0AV02 714 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 C2orf78A6NCI8 922 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 COCHO43405 550 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 OAS1P00973 400 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 TCP1P17987 556 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 IGFBP4P22692 258 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 CXCR5P32302 372 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 ATP5C1P36542 298 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 PEX5P50542 639 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 TBX4P57082 545 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 AMPD2Q01433 879 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 ADGRE1Q14246 886 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 TRIP4Q15650 581 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 KCNT1Q5JUK3 1230 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 GRASPQ7Z6J2 395 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 KATNAL2Q8IYT4 538 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 ZNF276Q8N554 614 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 CCDC185Q8N715 623 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 SNRNP25Q9BV90 132 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 MTMR10Q9NXD2 777 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 COL6A3P12111 3177 aa16.03■□□□□ 0.16
HERPUD1-219ENST00000570273 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 RARAP10276 462 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 GJA1P17302 382 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 CCR2P41597 374 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 CXCR3P49682 368 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 NTHL1P78549 312 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 ZNF211Q13398 564 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 NNTQ13423 1086 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 ATP13A4Q4VNC1 1196 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 ARHGAP15Q53QZ3 475 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 BOLA3Q53S33 107 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 ZC3H12AQ5D1E8 599 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 EFHC2Q5JST6 749 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 SEL1L2Q5TEA6 688 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 TXNDC8Q6A555 127 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 ANKRD54Q6NXT1 300 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 KLHDC10Q6PID8 442 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 TMEM184AQ6ZMB5 413 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms