RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139	SLC13A2	Q13183	592 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	RAB32	Q13637	225 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	SPARCL1	Q14515	664 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	HABP2	Q14520	560 aa	Predicted RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	QRICH1	Q2TAL8	776 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	FAAH2	Q6GMR7	532 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	RETSAT	Q6NUM9	610 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	FAM173B	Q6P4H8	233 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	ARMC9	Q7Z3E5	817 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	CELF5	Q8N6W0	485 aa	Known RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	CCDC89	Q8N998	374 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	GPT2	Q8TD30	523 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	ACER1	Q8TDN7	264 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	CASKIN2	Q8WXE0	1202 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	MRPS27	Q92552	414 aa	Known RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	CDCA5	Q96FF9	252 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	P2RX7	Q99572	595 aa	Known RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	SLF1	Q9BQI6	1058 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	SORBS1	Q9BX66	1292 aa	Known RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	ZNF518B	Q9C0D4	1074 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	BCAS3	Q9H6U6	928 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	GJB4	Q9NTQ9	266 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	TMOD4	Q9NZQ9	345 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	SRRD	Q9UH36	339 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	TRPS1	Q9UHF7	1281 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	MAN2B2	Q9Y2E5	1009 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	TMEM98	Q9Y2Y6	226 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	MRPL11	Q9Y3B7	192 aa	Known RBP	7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	RABGAP1	Q9Y3P9	1069 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139		A0A0G2JMZ2	1700 aa		7.75	□□□□□ -1.17
CNOT1-222	ENST00000570139	FAM237A	A0A1B0GTK4	181 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139		H0Y858	1186 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	UBE2Q2L	H0YL09	131 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	F2RL2	O00254	374 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	KIN	O60870	393 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	MT-ND5	P03915	603 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	GCFC2	P16383	781 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	CMA1	P23946	247 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PRPH	P41219	470 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	RXRG	P48443	463 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	FLT3LG	P49771	235 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PTPA	Q15257	358 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	CAVIN1	Q6NZI2	390 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	CNKSR3	Q6P9H4	555 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	MOXD1	Q6UVY6	613 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PIK3AP1	Q6ZUJ8	805 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	RNF44	Q7L0R7	432 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	RASGRP2	Q7LDG7	609 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	NEK8	Q86SG6	692 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	LDHD	Q86WU2	507 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	WFDC3	Q8IUB2	231 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	FLCN	Q8NFG4	579 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	SNRNP27	Q8WVK2	155 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PIBF1	Q8WXW3	757 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	NKD2	Q969F2	451 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	GFM2	Q969S9	779 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	ADAM7	Q9H2U9	754 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PSTPIP2	Q9H939	334 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	VAT1L	Q9HCJ6	419 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	NECTIN3	Q9NQS3	549 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	TLR9	Q9NR96	1032 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	KCND1	Q9NSA2	647 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	CCDC39	Q9UFE4	941 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	MAGEL2	Q9UJ55	1249 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	HOOK1	Q9UJC3	728 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	AJAP1	Q9UKB5	411 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PCDHA7	Q9UN72	937 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	VWA7	Q9Y334	891 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	SRPRB	Q9Y5M8	271 aa	Known RBP	7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	CLIC4	Q9Y696	253 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	PTPRF	P10586	1907 aa		7.74	□□□□□ -1.17
CNOT1-222	ENST00000570139	ADM5	C9JUS6	153 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	BTN3A1	O00481	513 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	PODXL	O00592	558 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CXCL11	O14625	94 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	AREL1	O15033	823 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	N4BP3	O15049	544 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ADCY6	O43306	1168 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	SNX2	O60749	519 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ZBED4	O75132	1171 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CAVIN2	O95810	425 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ICAM1	P05362	532 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CD1A	P06126	327 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CYP2C8	P10632	490 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	SDHB	P21912	280 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	SLC16A2	P36021	539 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	TOB1	P50616	345 aa	Predicted RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	ATP2C1	P98194	919 aa	Predicted RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	GHRHR	Q02643	423 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CEBPZ	Q03701	1054 aa	Known RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	CACNB2	Q08289	660 aa	Predicted RBP	7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	FSTL1	Q12841	308 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	PPIL2	Q13356	520 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	MTM1	Q13496	603 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	VGLL4	Q14135	290 aa		7.73	□□□□□ -1.17
CNOT1-222	ENST00000570139	PTK2B	Q14289	1009 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms