RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 KIDINS220Q9ULH0 1771 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 XDHP47989 1333 aa4.21□□□□□ -1.73
UBR1-211ENST00000569971 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.73
UBR1-211ENST00000569971 RNF123Q5XPI4 1314 aa4.21□□□□□ -1.73
UBR1-211ENST00000569971 POGZQ7Z3K3 1410 aa4.21□□□□□ -1.73
UBR1-211ENST00000569971 ASXL1Q8IXJ9 1541 aa4.21□□□□□ -1.73
UBR1-211ENST00000569971 MROH1Q8NDA8 1641 aa4.21□□□□□ -1.73
UBR1-211ENST00000569971 PRAMEF33A0A0G2JMD5 474 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 AHRRA9YTQ3 701 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 ADM5C9JUS6 153 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 NARSO43776 548 aaKnown RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 PRAMEF10O60809 474 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 PPP6R2O75170 966 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 TAF5LO75529 589 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 RPS6KA4O75676 772 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 KRT38O76015 456 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 RECQL4O94761 1208 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 PRKCBP05771 671 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 HLA-DOAP06340 250 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 RXRAP19793 462 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 CD6P30203 668 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 NPTX2P47972 431 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 PGDP52209 483 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 MPP1Q00013 466 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 SP2Q02086 613 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 CCNIQ14094 377 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 WDR43Q15061 677 aaKnown RBP eCLIP4.21□□□□□ -1.74
UBR1-211ENST00000569971 LY6KQ17RY6 165 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 PREPLQ4J6C6 727 aaPredicted RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 CC2D1BQ5T0F9 858 aaKnown RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 RBM20Q5T481 1227 aaKnown RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 CLEC9AQ6UXN8 241 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 LRRC55Q6ZSA7 311 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 HTR3DQ70Z44 454 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 RSRC2Q7L4I2 434 aaKnown RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 PCGF5Q86SE9 256 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 HEATR4Q86WZ0 1026 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 SLC15A3Q8IY34 581 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 ADGRG5Q8IZF4 528 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 TMEM132CQ8N3T6 1108 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 OR6Y1Q8NGX8 325 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 ABHD5Q8WTS1 349 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 HERVK_113Q902F9 699 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 RSC1A1Q92681 617 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 ZDHHC12Q96GR4 267 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 COG8Q96MW5 612 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 DCLRE1CQ96SD1 692 aaKnown RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 SLC26A6Q9BXS9 759 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 AMBRA1Q9C0C7 1298 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 BRD8Q9H0E9 1235 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 TMX4Q9H1E5 349 aaPredicted RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 VPS16Q9H269 839 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 WASH6PQ9NQA3 447 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 TRPM5Q9NZQ8 1165 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 RNF181Q9P0P0 153 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 VPS51Q9UID3 782 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 SERTAD3Q9UJW9 196 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 USP22Q9UPT9 525 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 SORCS3Q9UPU3 1222 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 MAP3K2Q9Y2U5 619 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 NEU2Q9Y3R4 380 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 CHST2Q9Y4C5 530 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 NEO1Q92859 1461 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 MLH3Q9UHC1 1453 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 PPRC1Q5VV67 1664 aaKnown RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 IFT172Q9UG01 1749 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 ABCA6Q8N139 1617 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 BLMP54132 1417 aaPredicted RBP4.21□□□□□ -1.74
UBR1-211ENST00000569971 RPGRIP1LQ68CZ1 1315 aa4.21□□□□□ -1.74
UBR1-211ENST00000569971 SETBP1Q9Y6X0 1596 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 NPC1L1Q9UHC9 1359 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 A0A1W2PS29 197 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 MYADML2A6NDP7 307 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM90A18PA6NE21 464 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM90A16PA6NEW6 464 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 A6NLC8 198 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM90A9PA6NNJ1 464 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM90A5PA8MXJ8 464 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 HOXC11O43248 304 aaPredicted RBP4.2□□□□□ -1.74
UBR1-211ENST00000569971 DHHO43323 396 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 SNX2O60749 519 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 SCAF4O95104 1147 aaKnown RBP4.2□□□□□ -1.74
UBR1-211ENST00000569971 MBD4O95243 580 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 CD4P01730 458 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 ERBB2P04626 1255 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM163BP0C2L3 166 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM90A15PP0C7V4 464 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 FAM90A14PP0C7W9 464 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 GATA3P23771 443 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 PPIFP30405 207 aaKnown RBP4.2□□□□□ -1.74
UBR1-211ENST00000569971 MAN2A2P49641 1150 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 PAPOLAP51003 745 aaKnown RBP4.2□□□□□ -1.74
UBR1-211ENST00000569971 SEC24CP53992 1094 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 ACTR2P61160 394 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 RPS7P62081 194 aaKnown RBP4.2□□□□□ -1.74
UBR1-211ENST00000569971 TUBB3Q13509 450 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 SLC12A1Q13621 1099 aa4.2□□□□□ -1.74
UBR1-211ENST00000569971 HLXQ14774 488 aaPredicted RBP4.2□□□□□ -1.74
UBR1-211ENST00000569971 DLGAP5Q15398 846 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms