RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 UBE2ZQ9H832 354 aaPredicted RBP12.86□□□□□ -0.35
NUP93-220ENST00000569842 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 MARCH2Q9P0N8 246 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 RASAL2Q9UJF2 1139 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 HYOU1Q9Y4L1 999 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 GRID2IPA4D2P6 1211 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
NUP93-220ENST00000569842 PALMO75781 387 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 DESP17661 470 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 HDCP19113 662 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 KCNA5P22460 613 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 SMRP1Q8NCR6 262 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 CENPIQ92674 756 aaPredicted RBP12.86□□□□□ -0.35
NUP93-220ENST00000569842 RIPOR3Q96MK2 946 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 CLUHO75153 1309 aa12.86□□□□□ -0.35
NUP93-220ENST00000569842 ATXN1P54253 815 aaKnown RBP12.85□□□□□ -0.35
NUP93-220ENST00000569842 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
NUP93-220ENST00000569842 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 NIPA2Q8N8Q9 360 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 XIRP2A4UGR9 3374 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 TRAV19A0A0A6YYK7 116 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
NUP93-220ENST00000569842 RNF8O76064 485 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 IGLV3-25P01717 112 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 MBL2P11226 248 aaPredicted RBP12.85□□□□□ -0.35
NUP93-220ENST00000569842 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUP93-220ENST00000569842 GBP1P32455 592 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 HDAC4P56524 1084 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 C11orf63Q6NUN7 778 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
NUP93-220ENST00000569842 STRADAQ7RTN6 431 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 LRRC57Q8N9N7 239 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
NUP93-220ENST00000569842 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUP93-220ENST00000569842 ALG6Q9Y672 507 aa12.85□□□□□ -0.35
NUP93-220ENST00000569842 SLC12A8A0AV02 714 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 IRAK2O43187 625 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 LRCH4O75427 683 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 ENDOD1O94919 500 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 CKMP06732 381 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 COMTP21964 271 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 MTHFRP42898 656 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 SSR1P43307 286 aaKnown RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 ACAP1Q15027 740 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 POTEHQ6S545 545 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 PGAP3Q96FM1 320 aaPredicted RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 ZSWIM3Q96MP5 696 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 SMPD4Q9NXE4 827 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 KIF5CO60282 957 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 OLFM2O95897 454 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 HMBSP08397 361 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 MAN1A1P33908 653 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 SCYL2Q6P3W7 929 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 CMTM8Q8IZV2 173 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 HLA-CQ95604 372 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 SMG9Q9H0W8 520 aaKnown RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 USP15Q9Y4E8 981 aaPredicted RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 SPOPO43791 374 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 FTCDO95954 541 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 F9P00740 461 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 TCF4P15884 667 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 MIPP30301 263 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 AVPR1AP37288 418 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
NUP93-220ENST00000569842 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
NUP93-220ENST00000569842 SLFN11Q7Z7L1 901 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 FAM131BQ86XD5 332 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 SYCE1Q8N0S2 351 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 TRIM58Q8NG06 486 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 FGF13Q92913 245 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 RNF34Q969K3 372 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 POMKQ9H5K3 350 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 PCSK1NQ9UHG2 260 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 TLR6Q9Y2C9 796 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 CPQQ9Y646 472 aa12.84□□□□□ -0.35
NUP93-220ENST00000569842 TNNT1P13805 278 aa12.83□□□□□ -0.36
NUP93-220ENST00000569842 PFKLP17858 780 aa12.83□□□□□ -0.36
NUP93-220ENST00000569842 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.36
NUP93-220ENST00000569842 SLC1A1P43005 524 aa12.83□□□□□ -0.36
NUP93-220ENST00000569842 TBX4P57082 545 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms