RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 CHURC1-FNTBB4DL54 471 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 IGLV3-27P01718 113 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 CORO1AP31146 461 aaKnown RBP11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 CDH5P33151 784 aaPredicted RBP11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 NBL1P41271 181 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 CXCL12P48061 93 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 SLC6A11P48066 632 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 CCR3P51677 355 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 MESP2Q0VG99 397 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 ZSCAN23Q3MJ62 389 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 PKN3Q6P5Z2 889 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 NOP9Q86U38 636 aaKnown RBP11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 PASD1Q8IV76 773 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 FAM217AQ8IXS0 508 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 C1orf131Q8NDD1 294 aaKnown RBP11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 GOLGA1Q92805 767 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 P2RY11Q96G91 374 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 PPP1R13BQ96KQ4 1090 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 PNKPQ96T60 521 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 NLRC4Q9NPP4 1024 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 FAM86C1Q9NVL1 165 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 TJP2Q9UDY2 1190 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 AGO1Q9UL18 857 aaKnown RBP11.57□□□□□ -0.56
SHCBP1-207ENST00000569702 FRYLO94915 3013 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 K7EQS6 105 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 GFRA2O00451 464 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 TEX33O43247 280 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 RNF40O75150 1001 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CAVIN2O95810 425 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 GLI1P08151 1106 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 HMBSP08397 361 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 NCAM1P13591 858 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 SOX5P35711 763 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CHKAP35790 457 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 YWHAZP63104 245 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 SATB1Q01826 763 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CSTF1Q05048 431 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 NNTQ13423 1086 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 TAF5Q15542 800 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 ANO4Q32M45 955 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 PTPN20Q4JDL3 420 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 SYPL2Q5VXT5 272 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 ZNF677Q86XU0 584 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 DENND1CQ8IV53 801 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CPXM2Q8N436 756 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 TMEM35BQ8NCS4 154 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 FAM149B1Q96BN6 582 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 PIWIL1Q96J94 861 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 NOX5Q96PH1 765 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 TRIM62Q9BVG3 475 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 POPDC2Q9HBU9 364 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 C2orf42Q9NWW7 574 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 WDR35Q9P2L0 1181 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 NOCTQ9UK39 431 aaKnown RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 NAALADL1Q9UQQ1 740 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 CEP83Q9Y592 693 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 ATG2BQ96BY7 2078 aa11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 ZFHX2Q9C0A1 2572 aaPredicted RBP11.56□□□□□ -0.56
SHCBP1-207ENST00000569702 A0A1B0GTH6 734 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 K7ESF4 209 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 MSI1O43347 362 aaKnown RBP11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 CACNG3O60359 315 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 ATG13O75143 517 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 TULP3O75386 442 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 GFPT2O94808 682 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 KAT7O95251 611 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 LSM8O95777 96 aaKnown RBP11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 LATS1O95835 1130 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 PENKP01210 267 aaPredicted RBP11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 ERBB2P04626 1255 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 TYRP14679 529 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 HOXA6P31267 233 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 STAT1P42224 750 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 GRIA2P42262 883 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 GABRB2P47870 512 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 HARS2P49590 506 aaKnown RBP11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 SNX16P57768 344 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 RING1Q06587 406 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 EIF4EBP2Q13542 120 aaPredicted RBP11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 PPP2R5DQ14738 602 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 TAF3Q5VWG9 929 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 FYB2Q5VWT5 728 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 TSSK4Q6SA08 328 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 TPGS1Q6ZTW0 290 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 SFTPA1Q8IWL2 248 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 NAT16Q8N8M0 369 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 ZBTB44Q8NCP5 570 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 CCDC26Q8TAB7 109 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 DQX1Q8TE96 717 aaKnown RBP11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 SLC39A13Q96H72 371 aa11.55□□□□□ -0.56
SHCBP1-207ENST00000569702 PCMTD1Q96MG8 357 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms