RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ARHGAP18Q8N392 663 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 WDTC1Q8N5D0 677 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 CCDC33Q8N5R6 958 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 CPA5Q8WXQ8 436 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 KCTD13Q8WZ19 329 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 PIWIL1Q96J94 861 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 PPP1R13BQ96KQ4 1090 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 BBS2Q9BXC9 721 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 UBXN6Q9BZV1 441 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 GANQ9H2C0 597 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM124BQ9H5Z6 455 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 STRIP2Q9ULQ0 834 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 CNTN6Q9UQ52 1028 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 WDFY4Q6ZS81 3184 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 GOLGA6L7A0A1B0GV03 622 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 E2F8A0AVK6 867 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 LGALS16A8MUM7 142 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 GOLGA8SH3BPF8 625 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 PAPSS1O43252 624 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 ADH1CP00326 375 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 LTFP02788 710 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 ERBB2P04626 1255 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 SP9P0CG40 484 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 CYP11B1P15538 503 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 ZNF18P17022 549 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 PFKLP17858 780 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 OPRD1P41143 372 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 WASP42768 502 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 PITX1P78337 314 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 AMPD2Q01433 879 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 GAD2Q05329 585 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 DMWDQ09019 674 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 LRRC32Q14392 662 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 LPAL2Q16609 132 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 SYPL2Q5VXT5 272 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 PM20D1Q6GTS8 502 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM183BPQ6ZVS7 135 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 CACNA2D4Q7Z3S7 1137 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM71AQ8IYT1 594 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 MAML2Q8IZL2 1156 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 RNF214Q8ND24 703 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 RPLP0P6Q8NHW5 317 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 EZH1Q92800 747 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM81BQ96LP2 452 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 NAP1L5Q96NT1 182 aaPredicted RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 CPXM1Q96SM3 734 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 FUCA2Q9BTY2 467 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 NAA15Q9BXJ9 866 aaKnown RBP9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 STK33Q9BYT3 514 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 CNGB3Q9NQW8 809 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 SPHK2Q9NRA0 654 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 ABCC13Q9NSE7 274 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 CLIC5Q9NZA1 410 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 TBC1D14Q9P2M4 693 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 SIK3Q9Y2K2 1263 aa9.43□□□□□ -0.9
GTF3C1-210ENST00000569394 F5P12259 2224 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CACNA1IQ9P0X4 2223 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 TBC1D3BA6NDS4 549 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 F8VZ95 297 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 GOLGA6L19H0YKK7 550 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 TYRP14679 529 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 TCF3P15923 654 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 PTMSP20962 102 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 COG7P83436 770 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 SRSF5Q13243 272 aaKnown RBP9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CCINQ13939 588 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 IQCB1Q15051 598 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 GAB4Q2WGN9 574 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 FILIP1LQ4L180 1135 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 DCAF6Q58WW2 860 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 TMEM196Q5HYL7 178 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 NAA35Q5VZE5 725 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 RFWD3Q6PCD5 774 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 TOGARAM2Q6ZUX3 1019 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 HTR3DQ70Z44 454 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 APTXQ7Z2E3 356 aaKnown RBP9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 DEFB106AQ8N104 65 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 SLC30A5Q8TAD4 765 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 DDI1Q8WTU0 396 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CPLX3Q8WVH0 158 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 RNF34Q969K3 372 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 P2RY11Q96G91 374 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 HSFY1Q96LI6 401 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CDK5RAP1Q96SZ6 601 aaKnown RBP9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 PNKPQ96T60 521 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 SLC4A5Q9BY07 1137 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CHRDQ9H2X0 955 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 ARHGEF4Q9NR80 690 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 DNAJC17Q9NVM6 304 aaKnown RBP9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 STIM2Q9P246 746 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 AGO1Q9UL18 857 aaKnown RBP9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 INVSQ9Y283 1065 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CEP83Q9Y592 693 aa9.42□□□□□ -0.9
GTF3C1-210ENST00000569394 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms