RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RALGAPA1Q6GYQ0 2036 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 NUP205Q92621 2012 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 A0A1W2PQF6 199 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 BECN2A8MW95 431 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 M0QYV0 167 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 DCLK1O15075 740 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 IGLV3-27P01718 113 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 FYNP06241 537 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CCDC192P0DO97 292 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 BCKDHBP21953 392 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 GPD2P43304 727 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 DGKEP52429 567 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 SLC8A3P57103 927 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CETN1Q12798 172 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 MAPK8IP2Q13387 824 aaPredicted RBP8.19□□□□□ -1.1
CDH3-209ENST00000569080 TRIP4Q15650 581 aaPredicted RBP8.19□□□□□ -1.1
CDH3-209ENST00000569080 CNGA2Q16280 664 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CSRP2Q16527 193 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 MEA1Q16626 185 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 C10orf76Q5T2E6 689 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 BSPRYQ5W0U4 402 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 BTBD8Q5XKL5 378 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 EGFLAMQ63HQ2 1017 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 DPY19L2P1Q6NXN4 242 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 GJB7Q6PEY0 223 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 PRR23CQ6ZRP0 262 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 TPGS1Q6ZTW0 290 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CEP68Q76N32 757 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 ERMP1Q7Z2K6 904 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CACNA2D4Q7Z3S7 1137 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 ABCA7Q8IZY2 2146 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 MLKLQ8NB16 471 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 KCNV2Q8TDN2 545 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 CLEC4CQ8WTT0 213 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 BHMTQ93088 406 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 PLD4Q96BZ4 506 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 LOXL4Q96JB6 756 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 ACOX2Q99424 681 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 TPSD1Q9BZJ3 242 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 LRRC4Q9HBW1 653 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 SIX2Q9NPC8 291 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 ACP6Q9NPH0 428 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 STOML2Q9UJZ1 356 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 USP18Q9UMW8 372 aa8.19□□□□□ -1.1
CDH3-209ENST00000569080 SPTBN2O15020 2390 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 SLC12A8A0AV02 714 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 GTPBP10A4D1E9 387 aaKnown RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 TBC1D3BA6NDS4 549 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 PIK3R2O00459 728 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 MSI1O43347 362 aaKnown RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 HMBSP08397 361 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 GABRG2P18507 467 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 SLC9A1P19634 815 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 HOXD9P28356 352 aaPredicted RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 P2RY2P41231 377 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 RGS7P49802 495 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 MFAP3P55082 362 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 COG7P83436 770 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 ENPP2Q13822 863 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 PUM1Q14671 1186 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDH3-209ENST00000569080 STILQ15468 1287 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 GEN1Q17RS7 908 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 MAP7D1Q3KQU3 841 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 MIIPQ5JXC2 388 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 EOGTQ5NDL2 527 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 PMS2CLQ68D20 193 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 DENND1BQ6P3S1 775 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 RSRC2Q7L4I2 434 aaKnown RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 DENND1CQ8IV53 801 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 FMNL3Q8IVF7 1028 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 SIX6OS1Q8N1H7 587 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 ZNF513Q8N8E2 541 aaPredicted RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 IRGQQ8WZA9 623 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 SHC3Q92529 594 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 EDEM1Q92611 657 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 HSFY1Q96LI6 401 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 IPO9Q96P70 1041 aaKnown RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 GABRG3Q99928 467 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 CRACR2AQ9BSW2 395 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 RXFP3Q9NSD7 469 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 OLA1Q9NTK5 396 aaKnown RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 LMBRD1Q9NUN5 540 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 PLK2Q9NYY3 685 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 WDR35Q9P2L0 1181 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 APEX2Q9UBZ4 518 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 SFMBT1Q9UHJ3 866 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 CYTH4Q9UIA0 394 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 STRIP2Q9ULQ0 834 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 CLEC4EQ9ULY5 219 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 ZNF510Q9Y2H8 683 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 SLC27A6Q9Y2P4 619 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 HBS1LQ9Y450 684 aaKnown RBP8.18□□□□□ -1.1
CDH3-209ENST00000569080 PCDHGA5Q9Y5G8 931 aa8.18□□□□□ -1.1
CDH3-209ENST00000569080 THADAQ6YHU6 1953 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 TCRBV21S2A2A0A5A6 115 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms