RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
USB1-214ENST00000568848 SNX19Q92543 992 aa15.66■□□□□ 0.1
USB1-214ENST00000568848 SYAP1Q96A49 352 aaPredicted RBP15.66■□□□□ 0.1
USB1-214ENST00000568848 TNMDQ9H2S6 317 aa15.66■□□□□ 0.1
USB1-214ENST00000568848 KIAA1586Q9HCI6 787 aa15.66■□□□□ 0.1
USB1-214ENST00000568848 MARK1Q9P0L2 795 aa15.66■□□□□ 0.1
USB1-214ENST00000568848 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.66■□□□□ 0.1
USB1-214ENST00000568848 HELZ2Q9BYK8 2649 aaKnown RBP15.66■□□□□ 0.1
USB1-214ENST00000568848 ATP8B3O60423 1300 aa15.66■□□□□ 0.1
USB1-214ENST00000568848 STC2O76061 302 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 STAU1O95793 577 aaKnown RBP15.65■□□□□ 0.1
USB1-214ENST00000568848 AFMP43652 599 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 ASPAP45381 313 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 CSNK1EP49674 416 aaKnown RBP15.65■□□□□ 0.1
USB1-214ENST00000568848 TPMTP51580 245 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 MFAP3P55082 362 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 EHHADHQ08426 723 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 CYP4F3Q08477 520 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 CUL4BQ13620 913 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 STK38Q15208 465 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 HLA-BQ31612 363 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 KCNT1Q5JUK3 1230 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 C10orf120Q5SQS8 335 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 TMEM215Q68D42 235 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 Q6ZNB5 142 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 STXBP4Q6ZWJ1 553 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 NDRG1Q92597 394 aaKnown RBP15.65■□□□□ 0.1
USB1-214ENST00000568848 CYLDQ9NQC7 956 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 TLR8Q9NR97 1041 aaKnown RBP15.65■□□□□ 0.1
USB1-214ENST00000568848 USP36Q9P275 1121 aaKnown RBP15.65■□□□□ 0.1
USB1-214ENST00000568848 RASAL2Q9UJF2 1139 aa15.65■□□□□ 0.1
USB1-214ENST00000568848 FLNBO75369 2602 aaKnown RBP15.64■□□□□ 0.1
USB1-214ENST00000568848 A0A1B0GTW7 788 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 ZBTB24O43167 697 aaPredicted RBP15.64■□□□□ 0.09
USB1-214ENST00000568848 KIF20AO95235 890 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 RDXP35241 583 aaKnown RBP15.64■□□□□ 0.09
USB1-214ENST00000568848 ATP5C1P36542 298 aaKnown RBP15.64■□□□□ 0.09
USB1-214ENST00000568848 COPAP53621 1224 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 CKAP5Q14008 2032 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 WDR45BQ5MNZ6 344 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 C1orf220Q5T0J3 134 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 SYCP2LQ5T4T6 812 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 FYB2Q5VWT5 728 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 TMPRSS6Q8IU80 811 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 PARD3BQ8TEW8 1205 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 C6orf106Q9H6K1 298 aaPredicted RBP15.64■□□□□ 0.09
USB1-214ENST00000568848 TM7SF3Q9NS93 570 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
USB1-214ENST00000568848 WDR35Q9P2L0 1181 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 NAGPAQ9UK23 515 aa15.64■□□□□ 0.09
USB1-214ENST00000568848 LSM7Q9UK45 103 aaKnown RBP15.64■□□□□ 0.09
USB1-214ENST00000568848 CBX4O00257 560 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 FAM200BP0CF97 657 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 GNSP15586 552 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 CD58P19256 250 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 ATICP31939 592 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 EFEMP1Q12805 493 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 ZNF234Q14588 700 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 KIF19Q2TAC6 998 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 PRAMEF14Q5SWL7 426 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 RABEPKQ7Z6M1 372 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 LINC00301Q8NCQ3 95 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 BAHD1Q8TBE0 780 aaPredicted RBP15.63■□□□□ 0.09
USB1-214ENST00000568848 RHBDD1Q8TEB9 315 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 CYB5D2Q8WUJ1 264 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 DNASE2BQ8WZ79 361 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 TNIP3Q96KP6 325 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 MTG2Q9H4K7 406 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 FAM124BQ9H5Z6 455 aaPredicted RBP15.63■□□□□ 0.09
USB1-214ENST00000568848 APOBEC3GQ9HC16 384 aaKnown RBP15.63■□□□□ 0.09
USB1-214ENST00000568848 CSNK1G1Q9HCP0 422 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 ITM2CQ9NQX7 267 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 SCML2Q9UQR0 700 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 SNX11Q9Y5W9 270 aa15.63■□□□□ 0.09
USB1-214ENST00000568848 TRABD2BA6NFA1 517 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 BCAT2O15382 392 aaPredicted RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 POLR2DO15514 142 aaKnown RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 TSPAN3O60637 253 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 CORO1AP31146 461 aaKnown RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 ACSL1P33121 698 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 MATKP42679 507 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 NASPP49321 788 aaPredicted RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 SLC14A1Q13336 389 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 STARD3Q14849 445 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 NUDT18Q6ZVK8 323 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 UNC13DQ70J99 1090 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 DENND1CQ8IV53 801 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 FOXJ1Q92949 421 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 SIPA1Q96FS4 1042 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 CIPCQ9C0C6 399 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 MMRN2Q9H8L6 949 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 VRTNQ9H8Y1 702 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 THAP10Q9P2Z0 257 aaPredicted RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 SUSD2Q9UGT4 822 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 FBXO10Q9UK96 956 aa15.62■□□□□ 0.09
USB1-214ENST00000568848 APOBEC2Q9Y235 224 aaKnown RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 TP53BP1Q12888 1972 aaPredicted RBP15.62■□□□□ 0.09
USB1-214ENST00000568848 METTL12A8MUP2 240 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms