RNA–Protein interactions for RNA: ENST00000568698.5

CDH16-208, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 2,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-208ENST00000568698 ECT2Q9H8V3 914 aa17.1■□□□□ 0.33
CDH16-208ENST00000568698 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
CDH16-208ENST00000568698 PSMC3IPQ9P2W1 217 aaPredicted RBP17.1■□□□□ 0.33
CDH16-208ENST00000568698 AGAP1Q9UPQ3 857 aa17.1■□□□□ 0.33
CDH16-208ENST00000568698 STARD13Q9Y3M8 1113 aa17.1■□□□□ 0.33
CDH16-208ENST00000568698 KIF1CO43896 1103 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 ZSCAN5DPP0CG00 497 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 KRT3P12035 628 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 MYOGP15173 224 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 NQO1P15559 274 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 PBX3P40426 434 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 PLCB3Q01970 1234 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 SLC25A11Q02978 314 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 ACAP1Q15027 740 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 ZC3H12AQ5D1E8 599 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 DENND1AQ8TEH3 1009 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 NLRC5Q86WI3 1866 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 ARHGEF15O94989 841 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 ITGB1P05556 798 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 KRT19P08727 400 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 RPL9P32969 192 aaKnown RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 SLC11A1P49279 550 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 ARL4CP56559 192 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 HIF1AQ16665 826 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 ZBED8Q8IZ13 594 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 BCO2Q9BYV7 579 aa17.09■□□□□ 0.33
CDH16-208ENST00000568698 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.09■□□□□ 0.33
CDH16-208ENST00000568698 FOXO6A8MYZ6 492 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 NRP1O14786 923 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 SPTLC1O15269 473 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 GALTP07902 379 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 ETS1P14921 441 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 KRT15P19012 456 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 WDR4P57081 412 aaKnown RBP17.08■□□□□ 0.33
CDH16-208ENST00000568698 RBP5P82980 135 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 ZKSCAN8Q15776 578 aaPredicted RBP17.08■□□□□ 0.33
CDH16-208ENST00000568698 EFHC2Q5JST6 749 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 CYP4A22Q5TCH4 519 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 TXNRD3NBQ6F5E7 133 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 DENND1BQ6P3S1 775 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 TMEM173Q86WV6 379 aaPredicted RBP17.08■□□□□ 0.33
CDH16-208ENST00000568698 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 CLP1Q92989 425 aaKnown RBP17.08■□□□□ 0.33
CDH16-208ENST00000568698 UROC1Q96N76 676 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 TMEM121Q9BTD3 319 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 NOD2Q9HC29 1040 aa17.08■□□□□ 0.33
CDH16-208ENST00000568698 POC1B-GALNT4F8VUJ3 575 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 ATP5HO75947 161 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 FOXN2P32314 431 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 OR1G1P47890 313 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 BCAR1P56945 870 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDH16-208ENST00000568698 PDIA2Q13087 525 aaKnown RBP17.08■□□□□ 0.32
CDH16-208ENST00000568698 PDK4Q16654 411 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 PTPN20Q4JDL3 420 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 CGB2Q6NT52 195 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 TBC1D1Q86TI0 1168 aaPredicted RBP17.08■□□□□ 0.32
CDH16-208ENST00000568698 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 MARCH5Q9NX47 278 aa17.08■□□□□ 0.32
CDH16-208ENST00000568698 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 LRCH4O75427 683 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 CD19P15391 556 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 KDELR1P24390 212 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 RFC1P35251 1148 aaPredicted RBP17.07■□□□□ 0.32
CDH16-208ENST00000568698 PBX2P40425 430 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 GEMIN4P57678 1058 aaKnown RBP17.07■□□□□ 0.32
CDH16-208ENST00000568698 LILRA4P59901 499 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 PSMC1P62191 440 aaKnown RBP17.07■□□□□ 0.32
CDH16-208ENST00000568698 KLHL38Q2WGJ6 581 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 FBF1Q8TES7 1133 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
CDH16-208ENST00000568698 VRTNQ9H8Y1 702 aa17.07■□□□□ 0.32
CDH16-208ENST00000568698 YBX2Q9Y2T7 364 aaKnown RBP17.07■□□□□ 0.32
CDH16-208ENST00000568698 PRG3Q9Y2Y8 225 aaPredicted RBP17.07■□□□□ 0.32
CDH16-208ENST00000568698 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.06■□□□□ 0.32
CDH16-208ENST00000568698 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.06■□□□□ 0.32
CDH16-208ENST00000568698 LINC01553A4QN01 128 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 E7ESA3 106 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 TMEM189-UBE2V1I3L0A0 370 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 ZWINTO95229 277 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 STAU1O95793 577 aaKnown RBP17.06■□□□□ 0.32
CDH16-208ENST00000568698 IFNB1P01574 187 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 ALDH2P05091 517 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 CCNB1P14635 433 aa17.06■□□□□ 0.32
CDH16-208ENST00000568698 OTUD4Q01804 1114 aaKnown RBP17.06■□□□□ 0.32
CDH16-208ENST00000568698 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms