RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 UBXN6Q9BZV1 441 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 CRISPLD2Q9H0B8 497 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SLC27A5Q9Y2P5 690 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 MYO18AQ92614 2054 aaKnown RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 VWA8A3KMH1 1905 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 GOLGA6CA6NDK9 693 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PPFIA2O75334 1257 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PARNO95453 639 aaKnown RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 ACSL3O95573 720 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 GOLGA6DP0CG33 693 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 LBX1P52954 281 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 BASP1P80723 227 aaKnown RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 PPARDQ03181 441 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 MTM1Q13496 603 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SLMAPQ14BN4 828 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 DPYSL2Q16555 572 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 MGAT5BQ3V5L5 792 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 HP1BP3Q5SSJ5 553 aaPredicted RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 BTBD8Q5XKL5 378 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 DENND2CQ68D51 928 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 KIAA1841Q6NSI8 718 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PQLC3Q8N755 202 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 BBOF1Q8ND07 529 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 ARL8AQ96BM9 186 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 ZCWPW1Q9H0M4 648 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 WDCPQ9H6R7 721 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PRDM10Q9NQV6 1147 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 MARCH5Q9NX47 278 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 GOLGA6AQ9NYA3 693 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 CWC15Q9P013 229 aaKnown RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 FZD10Q9ULW2 581 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 NEU2Q9Y3R4 380 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PCDHB5Q9Y5E4 795 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 TLDC2A0PJX2 215 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 KCNN4O15554 427 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 CXCL10P02778 98 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 CSF2RAP15509 400 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 GBE1Q04446 702 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 SLC29A2Q14542 456 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 NOMO1Q15155 1222 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 LRRC26Q2I0M4 334 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 RTP2Q5QGT7 225 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 OTUD1Q5VV17 481 aaPredicted RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 PRSS55Q6UWB4 352 aaPredicted RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 TAS1R1Q7RTX1 841 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 TTC9BQ8N6N2 239 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 CSPG4P5Q96PW8 444 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 PABPC3Q9H361 631 aaKnown RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 C11orf49Q9H6J7 331 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 MTMR10Q9NXD2 777 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 SFMBT1Q9UHJ3 866 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 TBX21Q9UL17 535 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 TPX2Q9ULW0 747 aaKnown RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 ZNF638Q14966 1978 aaKnown RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 MICAL3Q7RTP6 2002 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 NUP205Q92621 2012 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 EEF2KO00418 725 aaKnown RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 TP73O15350 636 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 MYZAPP0CAP1 466 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 ACRP10323 421 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 RAG1P15918 1043 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 RPL17P18621 184 aaKnown RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 GJA8P48165 433 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 CTCFP49711 727 aaPredicted RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 YWHAGP61981 247 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMG1-215ENST00000568239 CAV1Q03135 178 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 ARL13BQ3SXY8 428 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 KRT71Q3SY84 523 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 UBAP2Q5T6F2 1119 aaKnown RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 CNKSR3Q6P9H4 555 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 SH2D3CQ8N5H7 860 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 RNF139Q8WU17 664 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 NT5C3BQ969T7 300 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 C9orf72Q96LT7 481 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 TTPALQ9BTX7 342 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 FRMD8P1Q9BZ68 369 aaPredicted RBP7.33□□□□□ -1.24
SMG1-215ENST00000568239 TKTL2Q9H0I9 626 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 SIK2Q9H0K1 926 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 PCDH9Q9HC56 1237 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 ETNK2Q9NVF9 386 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 MFHAS1Q9Y4C4 1052 aa7.33□□□□□ -1.24
SMG1-215ENST00000568239 DNALI1O14645 258 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 SHBGP04278 402 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 RARGP13631 454 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TGM2P21980 687 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ITGB8P26012 769 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 RBL1P28749 1068 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ADRA1BP35368 520 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 ELAVL2Q12926 359 aaKnown RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 KYNUQ16719 465 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 SLC9A4Q6AI14 798 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 PM20D1Q6GTS8 502 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 CAPN12Q6ZSI9 719 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 BHLHA9Q7RTU4 235 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 TAC4Q86UU9 113 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 NUP93Q8N1F7 819 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 BCL7CQ8WUZ0 217 aaPredicted RBP7.32□□□□□ -1.24
SMG1-215ENST00000568239 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
SMG1-215ENST00000568239 CDC42EP4Q9H3Q1 356 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms