RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NALCNQ8IZF0 1738 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ANKRD33BA6NCL7 494 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 CXorf49A8MYA2 514 aaPredicted RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 SLC26A4O43511 780 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 KDELR1P24390 212 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 GNL1P36915 607 aaPredicted RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 DUOXA2Q1HG44 320 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 GPR107Q5VW38 600 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 AAGABQ6PD74 315 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 CMC1Q7Z7K0 106 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 SLC9A9Q8IVB4 645 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 IGDCC3Q8IVU1 814 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 SLC44A1Q8WWI5 657 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ZNF669Q96BR6 464 aaPredicted RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 RCN3Q96D15 328 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 PIF1Q9H611 641 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 EFCAB1Q9HAE3 211 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 DRG1Q9Y295 367 aaKnown RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 BCL9LQ86UU0 1499 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 H0YCG3 227 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 TPP1O14773 563 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ITM2AO43736 263 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ITGAVP06756 1048 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 SLC5A3P53794 718 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 LENG9Q96B70 501 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 SKA1Q96BD8 255 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 CIB1Q99828 191 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 NUB1Q9Y5A7 615 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 CYP1A1P04798 512 aaPredicted RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 SERPINE1P05121 402 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 BPGMP07738 259 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ERVK-10P10266 1014 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ME2P23368 584 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 SERPINB9P50453 376 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 NUP107P57740 925 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 MAPK11Q15759 364 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 C15orf59Q2T9L4 293 aaPredicted RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 TNS2Q63HR2 1409 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 SLFN12LQ6IEE8 588 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
PALB2-206ENST00000568219 FASTKD5Q7L8L6 764 aaKnown RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 PDSS2Q86YH6 399 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 UNC5BQ8IZJ1 945 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 FBXW8Q8N3Y1 598 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 PLEKHG4BQ96PX9 1271 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ZNF536O15090 1300 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 SPEF2Q9C093 1822 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 STX16-NPEPL1H3BU86 382 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 EXTL3O43909 919 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 CRTAMO95727 393 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 S100BP04271 92 aaPredicted RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 MTTPP55157 894 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 SFSWAPQ12872 951 aaKnown RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 CARTPTQ16568 116 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 OR5B17Q8NGF7 314 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ZFP28Q8NHY6 868 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 DCAKDQ8WVC6 231 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 SLCO2A1Q92959 643 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 CDCA7Q9BWT1 371 aaPredicted RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 CYP4F12Q9HCS2 524 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 TRNAU1APQ9NX07 287 aaKnown RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 DMTF1Q9Y222 760 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 GLRA3O75311 464 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 TGDSO95455 350 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 AMHP03971 560 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 PSAPP07602 524 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 IMPDH2P12268 514 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ITGB5P18084 799 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 NR4A1P22736 598 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 GMPRP36959 345 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 STT3AP46977 705 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 MYBPC2Q14324 1141 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 LDLRAP1Q5SW96 308 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 TDRD10Q5VZ19 366 aaKnown RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 ZBTB8OSQ8IWT0 167 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 PHTF2Q8N3S3 785 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 TMCO5AQ8N6Q1 288 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 GABPB2Q8TAK5 448 aaPredicted RBP11.23□□□□□ -0.61
PALB2-206ENST00000568219 SHKBP1Q8TBC3 707 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 LZICQ8WZA0 190 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 CASP10Q92851 521 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 MKL1Q969V6 931 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ARMC7Q9H6L4 198 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 ZNF358Q9NW07 568 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 GID8Q9NWU2 228 aa11.23□□□□□ -0.61
PALB2-206ENST00000568219 CCDC167Q9P0B6 97 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms