RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PUM1Q14671 1186 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLK3-219ENST00000567805 ELF2Q15723 593 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CRY1Q16526 586 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CSRP2Q16527 193 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 RSPO4Q2I0M5 234 aaPredicted RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 USP39Q53GS9 565 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 EOGTQ5NDL2 527 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 PM20D1Q6GTS8 502 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 TMEM270Q6UE05 265 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 LCLAT1Q6UWP7 414 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 PRR23CQ6ZRP0 262 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 RSRC2Q7L4I2 434 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 SCD5Q86SK9 330 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 KBTBD6Q86V97 674 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 C11orf74Q86VG3 221 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 RASSF3Q86WH2 238 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 TMEM25Q86YD3 366 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 MIB1Q86YT6 1006 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 SFTPA1Q8IWL2 248 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 PLPP6Q8IY26 295 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 SIX6OS1Q8N1H7 587 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 SCML4Q8N228 414 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 ALLCQ8N6M5 410 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 NAT16Q8N8M0 369 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 TERB1Q8NA31 727 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 IL17RCQ8NAC3 791 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 TXNDC5Q8NBS9 432 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 TSTD1Q8NFU3 115 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 LMO3Q8TAP4 145 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 KCTD13Q8WZ19 329 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 WBP2Q969T9 261 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CNOT6LQ96LI5 555 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 IPO9Q96P70 1041 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 XPO6Q96QU8 1125 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 BBS2Q9BXC9 721 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 SRRTQ9BXP5 876 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 ULBP1Q9BZM6 244 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 DCLK3Q9C098 648 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 ZMYND15Q9H091 742 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 LRRC4Q9HBW1 653 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 POLMQ9NP87 494 aaPredicted RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 PARD6AQ9NPB6 346 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CNGB3Q9NQW8 809 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 OLA1Q9NTK5 396 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 SEMA4GQ9NTN9 838 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 DNAJC17Q9NVM6 304 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 POLR3BQ9NW08 1133 aaPredicted RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 MARK1Q9P0L2 795 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 MARCH2Q9P0N8 246 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 RWDD2AQ9UIY3 292 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 RASAL2Q9UJF2 1139 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 NUDT5Q9UKK9 219 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CDV3Q9UKY7 258 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 STRIP2Q9ULQ0 834 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLK3-219ENST00000567805 STARD13Q9Y3M8 1113 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 PCDHB4Q9Y5E5 795 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLK3-219ENST00000567805 CKAP5Q14008 2032 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 NYNRINQ9P2P1 1898 aaKnown RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 SLC12A8A0AV02 714 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ANTXRLA6NF34 631 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 M0QYV0 167 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 SGK1O00141 431 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 TULP2O00295 520 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ADAM23O75077 832 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 RHOBTB1O94844 696 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 EPN2O95208 641 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 KLF8O95600 359 aaPredicted RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 KLKB1P03952 638 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 CORO1AP31146 461 aaKnown RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 DGKGP49619 791 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ZNF132P52740 706 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 STX17P56962 302 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ADIGQ0VDE8 80 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 EFEMP1Q12805 493 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 CNGA2Q16280 664 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 CAMK4Q16566 473 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 PLK5Q496M5 336 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 PKDCCQ504Y2 493 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 C10orf76Q5T2E6 689 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 GRAMD4Q6IC98 578 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ANO7Q6IWH7 933 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 TPGS1Q6ZTW0 290 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 RRAGAQ7L523 313 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ENOSF1Q7L5Y1 443 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 BHLHA9Q7RTU4 235 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 DGLUCYQ7Z3D6 616 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 FAM217AQ8IXS0 508 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 CPXM2Q8N436 756 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 CCDC33Q8N5R6 958 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 ZNF513Q8N8E2 541 aaPredicted RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 MLKLQ8NB16 471 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 RBBP8NLQ8NC74 664 aaPredicted RBP5.01□□□□□ -1.61
CLK3-219ENST00000567805 EHBP1Q8NDI1 1231 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 MDGA1Q8NFP4 955 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 UBA3Q8TBC4 463 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 NETO1Q8TDF5 533 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 RNF139Q8WU17 664 aa5.01□□□□□ -1.61
CLK3-219ENST00000567805 SLC35F5Q8WV83 523 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms