RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	MARK1	Q9P0L2	795 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	MARCH2	Q9P0N8	246 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	RASAL2	Q9UJF2	1139 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	USP18	Q9UMW8	372 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	CNTN6	Q9UQ52	1028 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	ASCC3	Q8N3C0	2202 aa	Known RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	MYO15A	Q9UKN7	3530 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	SLC12A8	A0AV02	714 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ANTXRL	A6NF34	631 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	YJEFN3	A6XGL0	299 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	PRR5-ARHGAP8	B1AHC4	643 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635		E7ENQ6	273 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	SGK1	O00141	431 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CACNG3	O60359	315 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ALDH1A2	O94788	518 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	RHOBTB1	O94844	696 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CALCA	P01258	141 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	HMBS	P08397	361 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CISD3	P0C7P0	127 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	KRT5	P13647	590 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	LCP1	P13796	627 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	BRD2	P25440	801 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CORO1A	P31146	461 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	MTIF2	P46199	727 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	RGS7	P49802	495 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZNF132	P52740	706 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ARHGAP8	P85298	464 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	LMNB2	Q03252	620 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ADIG	Q0VDE8	80 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.24	□□□□□ -1.25	9e-7	■■■■■ 27.5
SF3B3-209	ENST00000567635	CSRP2	Q16527	193 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	TPD52L1	Q16890	204 aa	Predicted RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	USP39	Q53GS9	565 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	C10orf76	Q5T2E6	689 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	GRAMD4	Q6IC98	578 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	SDE2	Q6IQ49	451 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	PMF1	Q6P1K2	205 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	TMEM92	Q6UXU6	159 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	GBP6	Q6ZN66	633 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ENOSF1	Q7L5Y1	443 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	BHLHA9	Q7RTU4	235 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	TRMT11	Q7Z4G4	463 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	IRF2BP1	Q8IU81	584 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	DENND1C	Q8IV53	801 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	TXNDC5	Q8NBS9	432 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	IRGQ	Q8WZA9	623 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	EDEM1	Q92611	657 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	RMDN1	Q96DB5	314 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CNOT6L	Q96LI5	555 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	FAM81B	Q96LP2	452 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	KREMEN1	Q96MU8	473 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZSWIM1	Q9BR11	485 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CRACR2A	Q9BSW2	395 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	POLM	Q9NP87	494 aa	Predicted RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	PARD6A	Q9NPB6	346 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CNGB3	Q9NQW8	809 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	ABCC13	Q9NSE7	274 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	PLK2	Q9NYY3	685 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	FBXO10	Q9UK96	956 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	AGO1	Q9UL18	857 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	STARD13	Q9Y3M8	1113 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	HBS1L	Q9Y450	684 aa	Known RBP	7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CABIN1	Q9Y6J0	2220 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	NUMA1	Q14980	2115 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CACNA1A	O00555	2505 aa		7.24	□□□□□ -1.25
SF3B3-209	ENST00000567635	CKAP5	Q14008	2032 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	CACNA1E	Q15878	2313 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ADAMTS9	Q9P2N4	1935 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	GTPBP10	A4D1E9	387 aa	Known RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635		M0QYV0	167 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	DCLK1	O15075	740 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	TRIM24	O15164	1050 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	MED7	O43513	233 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	FOXD2	O60548	495 aa	Predicted RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ADAM23	O75077	832 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	FBXO21	O94952	628 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	PENK	P01210	267 aa	Predicted RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	CYBB	P04839	570 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZNF806	P0C7X5	589 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	SLC9A1	P19634	815 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ERCC5	P28715	1186 aa	Predicted RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	NTSR1	P30989	418 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	USP8	P40818	1118 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ACADSB	P45954	432 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	HARS2	P49590	506 aa	Known RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	DGKG	P49619	791 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	DAOA	P59103	153 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	FOXK2	Q01167	660 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	BYSL	Q13895	437 aa	Known RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	TRIP4	Q15650	581 aa	Predicted RBP	7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ELF2	Q15723	593 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	PLK5	Q496M5	336 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ANO7	Q6IWH7	933 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	ERMP1	Q7Z2K6	904 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	C11orf74	Q86VG3	221 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	RASSF3	Q86WH2	238 aa		7.23	□□□□□ -1.25
SF3B3-209	ENST00000567635	FMNL3	Q8IVF7	1028 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms