RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
COMMD4-216ENST00000567023 SPACA7Q96KW9 195 aa14.94□□□□□ -0.02
COMMD4-216ENST00000567023 GABRG3Q99928 467 aa14.94□□□□□ -0.02
COMMD4-216ENST00000567023 MARCH2Q9P0N8 246 aa14.94□□□□□ -0.02
COMMD4-216ENST00000567023 SLC27A6Q9Y2P4 619 aa14.94□□□□□ -0.02
COMMD4-216ENST00000567023 NUP205Q92621 2012 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 THADAQ6YHU6 1953 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 TCRBV21S2A2A0A5A6 115 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 TULP2O00295 520 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 O00370 1275 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 GFRA2O00451 464 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 PAEPP09466 180 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 HOXB2P14652 356 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 GABRG2P18507 467 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 BST2Q10589 180 aaKnown RBP14.93□□□□□ -0.02
COMMD4-216ENST00000567023 MORC3Q14149 939 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 GOLGA7BQ2TAP0 167 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 FYB2Q5VWT5 728 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 EGFLAMQ63HQ2 1017 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 ISM2Q6H9L7 571 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 TCEAL6Q6IPX3 200 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 LCLAT1Q6UWP7 414 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 LPCAT2Q7L5N7 544 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 FAM217AQ8IXS0 508 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 CPXM2Q8N436 756 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 LMO3Q8TAP4 145 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 HMGB4Q8WW32 186 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 RLN3Q8WXF3 142 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 TCEAL3Q969E4 200 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 LSM14BQ9BX40 385 aaKnown RBP14.93□□□□□ -0.02
COMMD4-216ENST00000567023 ULBP1Q9BZM6 244 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 OLA1Q9NTK5 396 aaKnown RBP14.93□□□□□ -0.02
COMMD4-216ENST00000567023 BCCIPQ9P287 314 aaKnown RBP eCLIP14.93□□□□□ -0.02
COMMD4-216ENST00000567023 HESX1Q9UBX0 185 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 MBD1Q9UIS9 605 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-216ENST00000567023 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 AGO1Q9UL18 857 aaKnown RBP14.93□□□□□ -0.02
COMMD4-216ENST00000567023 STRIP2Q9ULQ0 834 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 PLXND1Q9Y4D7 1925 aa14.93□□□□□ -0.02
COMMD4-216ENST00000567023 LNP1A1A4G5 178 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 BICDL2A1A5D9 508 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 KHNYNO15037 678 aaKnown RBP14.92□□□□□ -0.02
COMMD4-216ENST00000567023 SETSIPP0DME0 302 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 CORO1AP31146 461 aaKnown RBP14.92□□□□□ -0.02
COMMD4-216ENST00000567023 ZNF132P52740 706 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 MARSP56192 900 aaKnown RBP14.92□□□□□ -0.02
COMMD4-216ENST00000567023 CETN1Q12798 172 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 TRIP4Q15650 581 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-216ENST00000567023 SDE2Q6IQ49 451 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 RSRC2Q7L4I2 434 aaKnown RBP14.92□□□□□ -0.02
COMMD4-216ENST00000567023 CHPFQ8IZ52 775 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 FRMD1Q8N878 549 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 SLC35F5Q8WV83 523 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 PLD4Q96BZ4 506 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 NT5C1BQ96P26 610 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 ACOX2Q99424 681 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 LRRC4Q9HBW1 653 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 CNGB3Q9NQW8 809 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 PLK2Q9NYY3 685 aa14.92□□□□□ -0.02
COMMD4-216ENST00000567023 RNF225M0QZC1 329 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 NPC1O15118 1278 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 GNA14O95837 355 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 CD19P15391 556 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 MFAP3P55082 362 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 LRMPQ12912 555 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 STILQ15468 1287 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 CNGA2Q16280 664 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 CCDC40Q4G0X9 1142 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 PEAR1Q5VY43 1037 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 BSPRYQ5W0U4 402 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 RNF43Q68DV7 783 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 TMEM270Q6UE05 265 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 CYP2U1Q7Z449 544 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 DENND1CQ8IV53 801 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 TRIM59Q8IWR1 403 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 UBA3Q8TBC4 463 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 IPO4Q8TEX9 1081 aaKnown RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 NELFBQ8WX92 580 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 TFAP2BQ92481 460 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 NDRG1Q92597 394 aaKnown RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 BHMTQ93088 406 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 IPO9Q96P70 1041 aaKnown RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 EDEM2Q9BV94 578 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 ABCC13Q9NSE7 274 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 CHMP5Q9NZZ3 219 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 EVLQ9UI08 416 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 STOML2Q9UJZ1 356 aa14.91□□□□□ -0.02
COMMD4-216ENST00000567023 HBS1LQ9Y450 684 aaKnown RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 CNOT1A5YKK6 2376 aaKnown RBP14.91□□□□□ -0.02
COMMD4-216ENST00000567023 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 YJEFN3A6XGL0 299 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 E7ENQ6 273 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 ZBTB24O43167 697 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-216ENST00000567023 MAP3K13O43283 966 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 GADD45BO75293 160 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-216ENST00000567023 ZNF217O75362 1048 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 HMBSP08397 361 aa14.9□□□□□ -0.02
COMMD4-216ENST00000567023 HOXD12P35452 270 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms