RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 ESYT3A0FGR9 886 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 LINC01553A4QN01 128 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 I6L893 689 aaPredicted RBP18.4■□□□□ 0.54
HERC2-208ENST00000566635 CST8O60676 142 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 RTN3O95197 1032 aaPredicted RBP18.4■□□□□ 0.54
HERC2-208ENST00000566635 H2AFXP16104 143 aaPredicted RBP18.4■□□□□ 0.54
HERC2-208ENST00000566635 L1CAMP32004 1257 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 MAGEA10P43363 369 aaPredicted RBP18.4■□□□□ 0.54
HERC2-208ENST00000566635 DR1Q01658 176 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 BEND5Q7L4P6 421 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 MON1AQ86VX9 555 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 GSPT2Q8IYD1 628 aaKnown RBP18.4■□□□□ 0.54
HERC2-208ENST00000566635 CASP10Q92851 521 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 LRRC19Q9H756 370 aa18.4■□□□□ 0.54
HERC2-208ENST00000566635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.4■□□□□ 0.54
HERC2-208ENST00000566635 MSI1O43347 362 aaKnown RBP18.39■□□□□ 0.53
HERC2-208ENST00000566635 IGLV3-25P01717 112 aa18.39■□□□□ 0.53
HERC2-208ENST00000566635 BMPR1AP36894 532 aa18.39■□□□□ 0.53
HERC2-208ENST00000566635 TUFMP49411 452 aaKnown RBP18.39■□□□□ 0.53
HERC2-208ENST00000566635 GUCY2DQ02846 1103 aa18.39■□□□□ 0.53
HERC2-208ENST00000566635 PDK2Q15119 407 aa18.39■□□□□ 0.53
HERC2-208ENST00000566635 FAM71BQ8TC56 605 aa18.39■□□□□ 0.53
HERC2-208ENST00000566635 SAE1Q9UBE0 346 aaPredicted RBP18.39■□□□□ 0.53
HERC2-208ENST00000566635 SFMBT1Q9UHJ3 866 aa18.39■□□□□ 0.53
HERC2-208ENST00000566635 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.38■□□□□ 0.53
HERC2-208ENST00000566635 CNPP09543 421 aaKnown RBP18.38■□□□□ 0.53
HERC2-208ENST00000566635 PTGIRP43119 386 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 FNTAP49354 379 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 WDR93Q6P2C0 686 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 BBS12Q6ZW61 710 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 CCDC105Q8IYK2 499 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 CCDC26Q8TAB7 109 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 SMOC2Q9H3U7 446 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 RXFP1Q9HBX9 757 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.38■□□□□ 0.53
HERC2-208ENST00000566635 FNIP2Q9P278 1114 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 PCYOX1Q9UHG3 505 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 EFR3BQ9Y2G0 817 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 LAMA3Q16787 3333 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 IRAK2O43187 625 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 MYBL2P10244 700 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 TRADDQ15628 312 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 ANKRD20A8PQ5CZ79 823 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 TMC7Q7Z402 723 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 JAMLQ86YT9 394 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 MAP7D3Q8IWC1 876 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 RNF157Q96PX1 679 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 TCF25Q9BQ70 676 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 ZNF670Q9BS34 389 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 EPB41L5Q9HCM4 733 aa18.38■□□□□ 0.53
HERC2-208ENST00000566635 CEP290O15078 2479 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 SPATA31D3P0C874 917 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 PECAM1P16284 738 aaPredicted RBP18.37■□□□□ 0.53
HERC2-208ENST00000566635 DNAJB1P25685 340 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 CXCR3P49682 368 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 CLCN6P51797 869 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 ERVFC1P60507 584 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 DHX34Q14147 1143 aaKnown RBP18.37■□□□□ 0.53
HERC2-208ENST00000566635 SHHQ15465 462 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 SPATA31D4Q6ZUB0 917 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 MAATS1Q7Z4T9 603 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 ARHGAP18Q8N392 663 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 PQLC3Q8N755 202 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 PCDH19Q8TAB3 1148 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 RNF139Q8WU17 664 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 NTAN1Q96AB6 310 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 TTLL2Q9BWV7 592 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 HSFX1Q9UBD0 423 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 STK39Q9UEW8 545 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 FBXW11Q9UKB1 542 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 PRRG1O14668 218 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 LIASO43766 372 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 CXCL14O95715 111 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 GOT1P17174 413 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 ADRA1BP35368 520 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 CREMQ03060 361 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 EIF4EBP2Q13542 120 aaPredicted RBP18.37■□□□□ 0.53
HERC2-208ENST00000566635 CCNG2Q16589 344 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 EFHC2Q5JST6 749 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 PLPP4Q5VZY2 271 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 NPNTQ6UXI9 565 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 GPR65Q8IYL9 337 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 CASKIN2Q8WXE0 1202 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 FAF2Q96CS3 445 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 MAK16Q9BXY0 300 aaKnown RBP18.37■□□□□ 0.53
HERC2-208ENST00000566635 ENTPD7Q9NQZ7 604 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 GDF3Q9NR23 364 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 DNPEPQ9ULA0 475 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 SNX10Q9Y5X0 201 aa18.37■□□□□ 0.53
HERC2-208ENST00000566635 F9P00740 461 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 RARGP13631 454 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 RBM10P98175 930 aaKnown RBP18.36■□□□□ 0.53
HERC2-208ENST00000566635 OTUD4Q01804 1114 aaKnown RBP18.36■□□□□ 0.53
HERC2-208ENST00000566635 SCAPQ12770 1279 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 TWF1Q12792 350 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 SND1Q7KZF4 910 aaKnown RBP eCLIP18.36■□□□□ 0.53
HERC2-208ENST00000566635 ACTL9Q8TC94 416 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.36■□□□□ 0.53
HERC2-208ENST00000566635 CCDC114Q96M63 670 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 CSPG4P5Q96PW8 444 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms