RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 LHX5Q9H2C1 402 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 PDZD7Q9H5P4 517 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 ACSS3Q9H6R3 686 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 SP110Q9HB58 689 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.49
CDH1-210ENST00000566612 DNAJC16Q9Y2G8 782 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 DGKIO75912 1065 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 APOEP02649 317 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 SETSIPP0DME0 302 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 GBE1Q04446 702 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 HIC1Q14526 733 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 ACAD11Q709F0 780 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 STRA8Q7Z7C7 330 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 HERPUD2Q9BSE4 406 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 NRDE2Q9H7Z3 1164 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 AIM2O14862 343 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 ABHD2P08910 425 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 CPB1P15086 417 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 PTP4A2Q12974 167 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 MFSD10Q14728 455 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.5
CDH1-210ENST00000566612 TMEM130Q8N3G9 435 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.5
CDH1-210ENST00000566612 SPDL1Q96EA4 605 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 APOPT1Q96IL0 206 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.5
CDH1-210ENST00000566612 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 GMNNO75496 209 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 TRPA1O75762 1119 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 DNAJC8O75937 253 aaPredicted RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 USP17L7P0C7H9 530 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ASPAP45381 313 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 STX1BP61266 288 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 GAD2Q05329 585 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 RCN1Q15293 331 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 PDK4Q16654 411 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 RMDN2Q96LZ7 410 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 SYT15Q9BQS2 421 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 MECRQ9BV79 373 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ULBP1Q9BZM6 244 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 TNRC6CQ9HCJ0 1690 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 KCNA3P22001 575 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ETFBP38117 255 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 OR1G1P47890 313 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 KPNA2P52292 529 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 HSP90AA5PQ58FG0 334 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 HABP4Q5JVS0 413 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 N4BP2L1Q5TBK1 243 aaPredicted RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 FITM2Q8N6M3 262 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 PCYT2Q99447 389 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ATXN3LQ9H3M9 355 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 PCDH18Q9HCL0 1135 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 IARS2Q9NSE4 1012 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 C2CD2Q9Y426 696 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ACTL7BQ9Y614 415 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 CNTNAP2Q9UHC6 1331 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 FAM237BA0A1B0GVD1 139 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 FCHO1O14526 889 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ERVK-10P10266 1014 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 CDC25CP30307 473 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ATXN1P54253 815 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 POLE2P56282 527 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 VSTM1Q6UX27 236 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 AGAP11Q8TF27 550 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ATP6V1E2Q96A05 226 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 IFT43Q96FT9 208 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 EIF2AQ9BY44 585 aaKnown RBP11.95□□□□□ -0.5
CDH1-210ENST00000566612 FZD8Q9H461 694 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 SLC24A3Q9HC58 644 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 ADA2Q9NZK5 511 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 DOCK2Q92608 1830 aa11.95□□□□□ -0.5
CDH1-210ENST00000566612 KRT16P08779 473 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 TPD52P55327 224 aaPredicted RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 AP2B1P63010 937 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 RPAINQ86UA6 219 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 MIB1Q86YT6 1006 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 TTC8Q8TAM2 541 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 SKA2Q8WVK7 121 aaPredicted RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 ELMO2Q96JJ3 720 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 HAPLN2Q9GZV7 340 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 CXorf56Q9H5V9 222 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 PCDHGC3Q9UN70 934 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 UBA6A0AVT1 1052 aaPredicted RBP11.94□□□□□ -0.5
CDH1-210ENST00000566612 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 SMIM10L2AP0DMW4 78 aa11.94□□□□□ -0.5
CDH1-210ENST00000566612 SMIM10L2BP0DMW5 78 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms