RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 NPY6RQ99463 290 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 BAG1Q99933 345 aaPredicted RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 TRIM62Q9BVG3 475 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 TRIM7Q9C029 511 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 RAB6CQ9H0N0 254 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 THAP2Q9H0W7 228 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 DEF6Q9H4E7 631 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 KIF9Q9HAQ2 790 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 KCNK12Q9HB15 430 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 OLA1Q9NTK5 396 aaKnown RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 OBP2AQ9NY56 170 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 MARCH2Q9P0N8 246 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 WDR35Q9P2L0 1181 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 SFMBT1Q9UHJ3 866 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 RASAL2Q9UJF2 1139 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 DNMT3LQ9UJW3 386 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 MYO18AQ92614 2054 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 EIF3CLB5ME19 914 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 I6L893 689 aaPredicted RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 LEFTY2O00292 366 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 DPYSL4O14531 572 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 SCAMP3O14828 347 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 AKR1B10O60218 316 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 STC2O76061 302 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 NDUFA10O95299 355 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 CYP1A2P05177 515 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 MYBL1P10243 752 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 IRF1P10914 325 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 ABCB4P21439 1286 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 RFC1P35251 1148 aaPredicted RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 ATP5C1P36542 298 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 MATKP42679 507 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 GALCP54803 685 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 NNTQ13423 1086 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 GRM2Q14416 872 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 TRIP4Q15650 581 aaPredicted RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 DCAF6Q58WW2 860 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 CCDC122Q5T0U0 273 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 RSRC2Q7L4I2 434 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 TMTC1Q8IUR5 882 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 CCDC170Q8IYT3 715 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 CELF5Q8N6W0 485 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 GOLGA1Q92805 767 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 P2RY11Q96G91 374 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 SLC39A13Q96H72 371 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 FCRL2Q96LA5 508 aaPredicted RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 CFAP57Q96MR6 1250 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 MCEEQ96PE7 176 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 TBCBQ99426 244 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 EIF3CQ99613 913 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 DDX23Q9BUQ8 820 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 ZFP14Q9HCL3 533 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 GKN1Q9NS71 199 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 CFAP97Q9P2B7 532 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 CNOT8Q9UFF9 292 aaKnown RBP8.52□□□□□ -1.05
CDH13-208ENST00000566333 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 ATG2BQ96BY7 2078 aa8.52□□□□□ -1.05
CDH13-208ENST00000566333 SLC12A8A0AV02 714 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 ANKRD62A6NC57 917 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 RCCD1A6NED2 376 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 SIGLEC16A6NMB1 481 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 GOLGA6L6A8MZA4 724 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 CCP110O43303 1012 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 NARSO43776 548 aaKnown RBP8.51□□□□□ -1.05
CDH13-208ENST00000566333 TRUB2O95900 331 aaKnown RBP8.51□□□□□ -1.05
CDH13-208ENST00000566333 KLKB1P03952 638 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 TMEM253P0C7T8 217 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 KRT3P12035 628 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 NOS2P35228 1153 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 PTPN9P43378 593 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 SULT1E1P49888 294 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 ATXN1P54253 815 aaKnown RBP8.51□□□□□ -1.05
CDH13-208ENST00000566333 RNASE9P60153 205 aaKnown RBP8.51□□□□□ -1.05
CDH13-208ENST00000566333 C15orf59Q2T9L4 293 aaPredicted RBP8.51□□□□□ -1.05
CDH13-208ENST00000566333 SLC25A52Q3SY17 297 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 CCDC14Q49A88 953 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 TADA2BQ86TJ2 420 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 DDX42Q86XP3 938 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDH13-208ENST00000566333 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 MFSD6LQ8IWD5 586 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 LRRC8AQ8IWT6 810 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 FAM217AQ8IXS0 508 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 ACRBPQ8NEB7 543 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 BPIFB1Q8TDL5 484 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 FNIP1Q8TF40 1166 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 RNF139Q8WU17 664 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 DEPDC1BQ8WUY9 529 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 RXFP2Q8WXD0 754 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 PLD4Q96BZ4 506 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 CHFRQ96EP1 664 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 PGAP3Q96FM1 320 aaPredicted RBP8.51□□□□□ -1.05
CDH13-208ENST00000566333 ZFYVE19Q96K21 471 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 DESI2Q9BSY9 194 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 SELENOOQ9BVL4 669 aa8.51□□□□□ -1.05
CDH13-208ENST00000566333 NUP85Q9BW27 656 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms