RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CDH3P22223 829 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 IFIT5Q13325 482 aaKnown RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 CAVIN4Q5BKX8 364 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 SLX4IPQ5VYV7 408 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 CCDC103Q8IW40 242 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 HIPK4Q8NE63 616 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 CABLES1Q8TDN4 633 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 GIMAP1Q8WWP7 306 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 FBXL8Q96CD0 374 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 RIBC2Q9H4K1 309 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 FAM96AQ9H5X1 160 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 C12orf10Q9HB07 376 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 ZFYVE28Q9HCC9 887 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 THG1LQ9NWX6 298 aaKnown RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 PRKAG2Q9UGJ0 569 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 SLC13A4Q9UKG4 626 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 POU2F3Q9UKI9 436 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 POC1B-GALNT4F8VUJ3 575 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 UCHL3P15374 230 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 RAG1P15918 1043 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 PSMA2P25787 234 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 SSTR3P32745 418 aaPredicted RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 RPA3P35244 121 aaPredicted RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 MAGEA6P43360 314 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 AP3M2P53677 418 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 EVA1CP58658 441 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 TRIM28Q13263 835 aaKnown RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 POU6F1Q14863 301 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 MMAAQ8IVH4 418 aaKnown RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 SNF8Q96H20 258 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 NACC1Q96RE7 527 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 TP63Q9H3D4 680 aaPredicted RBP3.01□□□□□ -1.93
CHD9-218ENST00000566029 RERGLQ9H628 205 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 RIC8BQ9NVN3 520 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 DOLKQ9UPQ8 538 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 USP54Q70EL1 1684 aa3.01□□□□□ -1.93
CHD9-218ENST00000566029 ATE1O95260 518 aa3□□□□□ -1.93
CHD9-218ENST00000566029 S100A9P06702 114 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 CHRNB1P11230 501 aa3□□□□□ -1.93
CHD9-218ENST00000566029 HSD3B2P26439 372 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PHBP35232 272 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SOX5P35711 763 aa3□□□□□ -1.93
CHD9-218ENST00000566029 AARS2Q5JTZ9 985 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SH2D5Q6ZV89 423 aa3□□□□□ -1.93
CHD9-218ENST00000566029 FRMD5Q7Z6J6 570 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TMEM126BQ8IUX1 230 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PPM1KQ8N3J5 372 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ADAMTS16Q8TE57 1224 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC20A1Q8WUM9 679 aa3□□□□□ -1.93
CHD9-218ENST00000566029 HIPK3Q9H422 1215 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KLHL1Q9NR64 748 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC9A8Q9Y2E8 581 aa3□□□□□ -1.93
CHD9-218ENST00000566029 LRP6O75581 1613 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CLUHO75153 1309 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SNTNA6NMZ2 147 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SPAG6O75602 509 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CA4P22748 312 aa3□□□□□ -1.93
CHD9-218ENST00000566029 DPP6P42658 865 aa3□□□□□ -1.93
CHD9-218ENST00000566029 NDST2P52849 883 aa3□□□□□ -1.93
CHD9-218ENST00000566029 GRM4Q14833 912 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ESCO1Q5FWF5 840 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CES4AQ5XG92 561 aa3□□□□□ -1.93
CHD9-218ENST00000566029 IGFN1Q86VF2 1251 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PQLC1Q8N2U9 271 aa3□□□□□ -1.93
CHD9-218ENST00000566029 HSPH1Q92598 858 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RNF34Q969K3 372 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC7A5P2Q9GIP4 190 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KCTD10Q9H3F6 313 aa3□□□□□ -1.93
CHD9-218ENST00000566029 COG4Q9H9E3 785 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CDKN2AIPQ9NXV6 580 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 CNOT11Q9UKZ1 510 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SLC8A2Q9UPR5 921 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CPQQ9Y646 472 aa3□□□□□ -1.93
CHD9-218ENST00000566029 DDX60Q8IY21 1712 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ESYT2A0FGR8 921 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ARHGAP42A6NI28 874 aa3□□□□□ -1.93
CHD9-218ENST00000566029 NOTOA8MTQ0 251 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SMIM22K7EJ46 135 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ITGB1P05556 798 aa3□□□□□ -1.93
CHD9-218ENST00000566029 JUNBP17275 347 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ACADSBP45954 432 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC25A3Q00325 362 aa3□□□□□ -1.93
CHD9-218ENST00000566029 WASHC5Q12768 1159 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TRAP1Q12931 704 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 AGERQ15109 404 aa3□□□□□ -1.93
CHD9-218ENST00000566029 DLG2Q15700 870 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TBCCQ15814 346 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TRIM60Q495X7 471 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TMTC4Q5T4D3 741 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CYP4A22Q5TCH4 519 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ANKMY2Q8IV38 441 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ARID3BQ8IVW6 561 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 MYO1HQ8N1T3 1032 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PDZD8Q8NEN9 1154 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PPP4R1Q8TF05 950 aa3□□□□□ -1.93
CHD9-218ENST00000566029 APOPT1Q96IL0 206 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KLF6Q99612 283 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 HOXD1Q9GZZ0 328 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CHMP1AQ9HD42 196 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms