RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ZNF677Q86XU0 584 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 SCUBE3Q8IX30 993 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 SPEM1Q8N4L4 309 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 SLC20A1Q8WUM9 679 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 EDEM1Q92611 657 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 GOLGA1Q92805 767 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 CPXM1Q96SM3 734 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 DCLK3Q9C098 648 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 SPHK2Q9NRA0 654 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 FAM86C1Q9NVL1 165 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 IFNKQ9P0W0 207 aa14.46□□□□□ -0.09
HERPUD1-210ENST00000565966 SLC12A8A0AV02 714 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 PAPSS1O43252 624 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 SART1O43290 800 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 EGFP01133 1207 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 HMBSP08397 361 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 MMEP08473 750 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 SP9P0CG40 484 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 EIF2DP41214 584 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 CXCL12P48061 93 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 CSTF1Q05048 431 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 PPP2R5DQ14738 602 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 ZNF528Q3MIS6 628 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 NAIF1Q69YI7 327 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 Q6ZNB5 142 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 TMEM25Q86YD3 366 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 FMNL3Q8IVF7 1028 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 TMEM35BQ8NCS4 154 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 CCDC26Q8TAB7 109 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 PPP1R13BQ96KQ4 1090 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 XPO4Q9C0E2 1151 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 TTYH3Q9C0H2 523 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 PRMT8Q9NR22 394 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 SFMBT1Q9UHJ3 866 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 MYO6Q9UM54 1294 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 CEP83Q9Y592 693 aa14.45□□□□□ -0.1
HERPUD1-210ENST00000565966 HOXC11O43248 304 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 ATG13O75143 517 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 KLKB1P03952 638 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 CHRNB2P17787 502 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 CORO1AP31146 461 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 CHKAP35790 457 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 NBL1P41271 181 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 SLC6A11P48066 632 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 SNX16P57768 344 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 FMO1Q01740 532 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 CDR2Q01850 454 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 ARID5AQ03989 594 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 TRIP4Q15650 581 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 ANO4Q32M45 955 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 PTPN20Q4JDL3 420 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 FIGNQ5HY92 759 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 MSANTD2Q6P1R3 559 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 Q6ZS52 159 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 PLD4Q96BZ4 506 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 NOX5Q96PH1 765 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 PNKPQ96T60 521 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 TRIM62Q9BVG3 475 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 EDEM3Q9BZQ6 932 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 WDR35Q9P2L0 1181 aa14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 HBS1LQ9Y450 684 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-210ENST00000565966 A0A0A0MRY4 1105 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 LRRC53A6NM62 1247 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 RNF40O75150 1001 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 LSM8O95777 96 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 ERBB2P04626 1255 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 CYP1A1P04798 512 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 FYNP06241 537 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 NCAM1P13591 858 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 FERP16591 822 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 HARS2P49590 506 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 NOMO3P69849 1222 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 PREPLQ4J6C6 727 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 ZC3H14Q6PJT7 736 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 TPGS1Q6ZTW0 290 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 BEND5Q7L4P6 421 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 IRF2BP2Q7Z5L9 587 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 C12orf40Q86WS4 652 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 DENND1CQ8IV53 801 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 FAM149B1Q96BN6 582 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 XPO6Q96QU8 1125 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 PHOX2BQ99453 314 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 NUP58Q9BVL2 599 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 FAM126AQ9BYI3 521 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 MARK1Q9P0L2 795 aa14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 AGO1Q9UL18 857 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-210ENST00000565966 FAM170AA1A519 330 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 CHURC1-FNTBB4DL54 471 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 PROB1E7EW31 1015 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 NEDD8-MDP1E9PL57 170 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 K7EQS6 105 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 CAPN9O14815 690 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 CBFA2T2O43439 604 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 PAPSS2O95340 614 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 APODP05090 189 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 GABRB2P47870 512 aa14.42□□□□□ -0.1
HERPUD1-210ENST00000565966 NRLP54845 237 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms