RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ZNF670	Q9BS34	389 aa		13.64	□□□□□ -0.23
SCAPER-215	ENST00000565507	SLC4A5	Q9BY07	1137 aa		13.64	□□□□□ -0.23
SCAPER-215	ENST00000565507	DPP3	Q9NY33	737 aa		13.64	□□□□□ -0.23
SCAPER-215	ENST00000565507	C2CD2	Q9Y426	696 aa		13.64	□□□□□ -0.23
SCAPER-215	ENST00000565507	LAMA3	Q16787	3333 aa		13.64	□□□□□ -0.23
SCAPER-215	ENST00000565507	SCN4A	P35499	1836 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	CYB561D2	O14569	222 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	METTL18	O95568	372 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	LMNA	P02545	664 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	RARB	P10826	455 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	TFE3	P19532	575 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	RBP5	P82980	135 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	SLC10A2	Q12908	348 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	BMPR2	Q13873	1038 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	TEX44	Q53QW1	395 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ACSBG2	Q5FVE4	666 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	TRMT10B	Q6PF06	316 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	MAMDC4	Q6UXC1	1216 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	TMEM110	Q86TL2	294 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ALYREF	Q86V81	257 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	SCUBE3	Q8IX30	993 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	KCNK4	Q9NYG8	393 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ERAP1	Q9NZ08	941 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	CPA4	Q9UI42	421 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	NME7	Q9Y5B8	376 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	FAM159B	A6NKW6	160 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	CAPN14	A8MX76	684 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	PAPSS1	O43252	624 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	LUC7L3	O95232	432 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ATP6V1C1	P21283	382 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	GCK	P35557	465 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	SLC6A3	Q01959	620 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	OCRL	Q01968	901 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	PRAMEF19	Q5SWL8	479 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	TAPT1	Q6NXT6	567 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	MPP5	Q8N3R9	675 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ARMC2	Q8NEN0	867 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	CFAP61	Q8NHU2	1237 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	SLC35F5	Q8WV83	523 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	APBB2	Q92870	758 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	IQCG	Q9H095	443 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	NRDE2	Q9H7Z3	1164 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	ARMCX1	Q9P291	453 aa		13.63	□□□□□ -0.23
SCAPER-215	ENST00000565507	GCAT	O75600	419 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	GSTA2	P09210	222 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	SDC4	P31431	198 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	KPNB1	Q14974	876 aa	Known RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	STIL	Q15468	1287 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	LGSN	Q5TDP6	509 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	TTC39C	Q8N584	583 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	WDR60	Q8WVS4	1066 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	FAM167B	Q9BTA0	163 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	B3GNT5	Q9BYG0	378 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	SLC13A1	Q9BZW2	595 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	C20orf27	Q9GZN8	174 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	CXCL16	Q9H2A7	254 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	MROH8	Q9H579	483 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZNF487	B1APH4	448 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	SKAP2	O75563	359 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	VTN	P04004	478 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	ESRRA	P11474	423 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	GBE1	Q04446	702 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZNF792	Q3KQV3	632 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZNF484	Q5JVG2	852 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	SPRYD7	Q5W111	196 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	ANO7	Q6IWH7	933 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	TREML1	Q86YW5	311 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	GSDMB	Q8TAX9	411 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	AFG1L	Q8WV93	481 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	E2F7	Q96AV8	911 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	EBNA1BP2	Q99848	306 aa	Known RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	MRPL45	Q9BRJ2	306 aa	Known RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	MAGEB5	Q9BZ81	275 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507	KAT6A	Q92794	2004 aa		13.62	□□□□□ -0.23
SCAPER-215	ENST00000565507		A6NHS1	94 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	SNAI1	O95863	264 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	CYP2F1	P24903	491 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	L1CAM	P32004	1257 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	GRIA1	P42261	906 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	ARHGAP1	Q07960	439 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	DPYSL2	Q16555	572 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	ACOT1	Q86TX2	421 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	MTBP	Q96DY7	904 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	ACAP3	Q96P50	834 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TRIM6	Q9C030	488 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	MTMR10	Q9NXD2	777 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	HESX1	Q9UBX0	185 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TSPAN1	O60635	241 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	SNN	O75324	88 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	KRT36	O76013	467 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	KRT38	O76015	456 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	ACADS	P16219	412 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TPSB2	P20231	275 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	CRHR1	P34998	444 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms