RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TCEAL3Q969E4 200 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 ACOX2Q99424 681 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 MARCH2Q9P0N8 246 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 WDR35Q9P2L0 1181 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 HESX1Q9UBX0 185 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
CMTM3-209ENST00000565003 STARD13Q9Y3M8 1113 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 PCDHB4Q9Y5E5 795 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 SLC12A8A0AV02 714 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 YJEFN3A6XGL0 299 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 PRRT4C9JH25 899 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 E7ENQ6 273 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 P4HA2O15460 535 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 FOXD2O60548 495 aaPredicted RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 GABBR2O75899 941 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 ALDH1A2O94788 518 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 RHOBTB1O94844 696 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 PENKP01210 267 aaPredicted RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 PAEPP09466 180 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 CISD3P0C7P0 127 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 P2RY2P41231 377 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 WASP42768 502 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 DGKGP49619 791 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 MARSP56192 900 aaKnown RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 COG7P83436 770 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 CREB5Q02930 508 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 KCNH2Q12809 1159 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 PREPLQ4J6C6 727 aaPredicted RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 AASDHQ4L235 1098 aaPredicted RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 LCLAT1Q6UWP7 414 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 RRAGAQ7L523 313 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 DENND1CQ8IV53 801 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 C12orf50Q8NA57 414 aaPredicted RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 KCNV2Q8TDN2 545 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 RLN3Q8WXF3 142 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 KCTD13Q8WZ19 329 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 EDEM1Q92611 657 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 ERLEC1Q96DZ1 483 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 IPO9Q96P70 1041 aaKnown RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 XPO6Q96QU8 1125 aaKnown RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 SRRTQ9BXP5 876 aaKnown RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 LRRC4Q9HBW1 653 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 CD248Q9HCU0 757 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 POLMQ9NP87 494 aaPredicted RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 BCCIPQ9P287 314 aaKnown RBP eCLIP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 AGO1Q9UL18 857 aaKnown RBP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 STRIP2Q9ULQ0 834 aa10.51□□□□□ -0.73
CMTM3-209ENST00000565003 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.51□□□□□ -0.73
CMTM3-209ENST00000565003 A0A1W2PQF6 199 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 BCLAF3A2AJT9 711 aaKnown RBP10.5□□□□□ -0.73
CMTM3-209ENST00000565003 M0QYV0 167 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 PIK3R2O00459 728 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 CAVIN2O95810 425 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 GNA14O95837 355 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 SETSIPP0DME0 302 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 HOXB2P14652 356 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 GABRG2P18507 467 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 NTSR1P30989 418 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 CHKAP35790 457 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 RGS7P49802 495 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 ZNF132P52740 706 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 LIMK1P53667 647 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 DAOAP59103 153 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 CAMK4Q16566 473 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 MAP7D1Q3KQU3 841 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 FYB2Q5VWT5 728 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 BSPRYQ5W0U4 402 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 KIAA1211LQ6NV74 962 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 PMF1Q6P1K2 205 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 NUDT18Q6ZVK8 323 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 TRMT11Q7Z4G4 463 aaKnown RBP10.5□□□□□ -0.73
CMTM3-209ENST00000565003 C11orf74Q86VG3 221 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 FMNL3Q8IVF7 1028 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 FAM217AQ8IXS0 508 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 CHPFQ8IZ52 775 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 SIX6OS1Q8N1H7 587 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 TRIML1Q8N9V2 468 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 RBBP8NLQ8NC74 664 aaPredicted RBP10.5□□□□□ -0.73
CMTM3-209ENST00000565003 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 SLC35F5Q8WV83 523 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 PLD4Q96BZ4 506 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 KREMEN1Q96MU8 473 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 MED15Q96RN5 788 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 DCLK3Q9C098 648 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 VPS45Q9NRW7 570 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 SFMBT1Q9UHJ3 866 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 MBD1Q9UIS9 605 aaPredicted RBP10.5□□□□□ -0.73
CMTM3-209ENST00000565003 FBXO10Q9UK96 956 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 KIAA1257Q9ULG3 409 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 CLEC4EQ9ULY5 219 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 ZNF510Q9Y2H8 683 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.5□□□□□ -0.73
CMTM3-209ENST00000565003 THADAQ6YHU6 1953 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 NUP205Q92621 2012 aa10.5□□□□□ -0.73
CMTM3-209ENST00000565003 WASH3PC4AMC7 463 aa10.49□□□□□ -0.73
CMTM3-209ENST00000565003 MSI1O43347 362 aaKnown RBP10.49□□□□□ -0.73
CMTM3-209ENST00000565003 AFPP02771 609 aaKnown RBP10.49□□□□□ -0.73
CMTM3-209ENST00000565003 LCP1P13796 627 aa10.49□□□□□ -0.73
CMTM3-209ENST00000565003 MFAP3P55082 362 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms