RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CLEC4CQ8WTT0 213 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 HINFPQ9BQA5 517 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 VPS16Q9H269 839 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 DNAJC17Q9NVM6 304 aaKnown RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 FANCLQ9NW38 375 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 MARK1Q9P0L2 795 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 AJAP1Q9UKB5 411 aaPredicted RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 AGO1Q9UL18 857 aaKnown RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 RAB23Q9ULC3 237 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 HBS1LQ9Y450 684 aaKnown RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 FOXN3O00409 490 aaPredicted RBP19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 SART1O43290 800 aaKnown RBP19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 TIE1P35590 1138 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 BPIFB4P59827 614 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 TRIP4Q15650 581 aaPredicted RBP19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 KLHDC7AQ5VTJ3 777 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 WDR5BQ86VZ2 330 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 ANKRD20A12PQ8NF67 263 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 BHMTQ93088 406 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 FAM149B1Q96BN6 582 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 EPC1Q9H2F5 836 aa19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 POLR3BQ9NW08 1133 aaPredicted RBP19.17■□□□□ 0.66
SYNGR3-204ENST00000564642 CACNG3O60359 315 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 CYBBP04839 570 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 NCAM1P13591 858 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 HOXC13P31276 330 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 KRT9P35527 623 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 PXNP49023 591 aaPredicted RBP19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 RPL34P49207 117 aaKnown RBP19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 MYL5Q02045 173 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 MESP2Q0VG99 397 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 KRT31Q15323 416 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 FKBP15Q5T1M5 1219 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 GRAMD4Q6IC98 578 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 SFTPA1Q8IWL2 248 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 PHTF2Q8N3S3 785 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 CCDC33Q8N5R6 958 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 HHIPQ96QV1 700 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 LSM14BQ9BX40 385 aaKnown RBP19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 SLC4A5Q9BY07 1137 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 PLK2Q9NYY3 685 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 TMEM63CQ9P1W3 806 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 PCDHGC3Q9UN70 934 aa19.16■□□□□ 0.66
SYNGR3-204ENST00000564642 CCDC163A0A0D9SF12 145 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 HRO43593 1189 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 KRT37O76014 449 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 KLF8O95600 359 aaPredicted RBP19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 CLCN1P35523 988 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 DGKGP49619 791 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 SIM2Q14190 667 aaPredicted RBP19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 DRAP1Q14919 205 aaPredicted RBP19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 HSF5Q4G112 596 aaPredicted RBP19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 C10orf76Q5T2E6 689 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 EMC10Q5UCC4 262 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 DPY19L2P1Q6NXN4 242 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 MSANTD2Q6P1R3 559 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 PRR23BQ6ZRT6 265 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 TMEM110Q86TL2 294 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 CPXM2Q8N436 756 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 TERB1Q8NA31 727 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 RUBCNQ92622 972 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 TRIM62Q9BVG3 475 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 NCDNQ9UBB6 729 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 CYTH4Q9UIA0 394 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 MMP17Q9ULZ9 603 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 SMG5Q9UPR3 1016 aaKnown RBP19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 CEP83Q9Y592 693 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 FHOD1Q9Y613 1164 aa19.15■□□□□ 0.66
SYNGR3-204ENST00000564642 ANTXRLA6NF34 631 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 E5RJQ4 531 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 CAPN9O14815 690 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 MSI1O43347 362 aaKnown RBP19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 APBB3O95704 486 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 PNMA6AP0CW24 399 aaPredicted RBP19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 UCHL3P15374 230 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 KIR2DL1P43626 348 aaPredicted RBP19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 SNX16P57768 344 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 TYRO3Q06418 890 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 CEP68Q76N32 757 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 SLC47A2Q86VL8 602 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 PASD1Q8IV76 773 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 UNC45BQ8IWX7 931 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 FAM71AQ8IYT1 594 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 ALLCQ8N6M5 410 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 TXNDC5Q8NBS9 432 aaKnown RBP19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 KCNV2Q8TDN2 545 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 DDI1Q8WTU0 396 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 NOX5Q96PH1 765 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 NAT10Q9H0A0 1025 aaKnown RBP19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 PDCL3Q9H2J4 239 aa19.14■□□□□ 0.65
SYNGR3-204ENST00000564642 CACNA1GO43497 2377 aa19.13■□□□□ 0.65
SYNGR3-204ENST00000564642 TRIM24O15164 1050 aa19.13■□□□□ 0.65
SYNGR3-204ENST00000564642 PAPSS1O43252 624 aaPredicted RBP19.13■□□□□ 0.65
SYNGR3-204ENST00000564642 SRSF5Q13243 272 aaKnown RBP19.13■□□□□ 0.65
SYNGR3-204ENST00000564642 PDCLQ13371 301 aa19.13■□□□□ 0.65
SYNGR3-204ENST00000564642 CRY1Q16526 586 aa19.13■□□□□ 0.65
SYNGR3-204ENST00000564642 EOGTQ5NDL2 527 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms