RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 WDR24Q96S15 920 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 TBCBQ99426 244 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 NAA15Q9BXJ9 866 aaKnown RBP3.59□□□□□ -1.83
CHD9-211ENST00000564600 AGO4Q9HCK5 861 aaKnown RBP3.59□□□□□ -1.83
CHD9-211ENST00000564600 PNPLA8Q9NP80 782 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 HEYLQ9NQ87 328 aaPredicted RBP3.59□□□□□ -1.83
CHD9-211ENST00000564600 VPS4AQ9UN37 437 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 PPM1GO15355 546 aaPredicted RBP3.58□□□□□ -1.84
CHD9-211ENST00000564600 NDST3O95803 873 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 TMIGD3P0DMS9 266 aaPredicted RBP3.58□□□□□ -1.84
CHD9-211ENST00000564600 PHKG2P15735 406 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 RPL17P18621 184 aaKnown RBP3.58□□□□□ -1.84
CHD9-211ENST00000564600 MST1P26927 711 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 IDUAP35475 653 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 GHRHRQ02643 423 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 ST3GAL2Q16842 350 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 CC2D1BQ5T0F9 858 aaKnown RBP3.58□□□□□ -1.84
CHD9-211ENST00000564600 DENND2CQ68D51 928 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 KRT28Q7Z3Y7 464 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 P3H2Q8IVL5 708 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 CCDC33Q8N5R6 958 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.58□□□□□ -1.84
CHD9-211ENST00000564600 C16orf52Q8NHV5 167 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 SPATA3Q8NHX4 192 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 IPCEF1Q8WWN9 437 aaPredicted RBP3.58□□□□□ -1.84
CHD9-211ENST00000564600 VPS50Q96JG6 964 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 GATA5Q9BWX5 397 aaPredicted RBP3.58□□□□□ -1.84
CHD9-211ENST00000564600 TMEM8AQ9HCN3 771 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 CHPF2Q9P2E5 772 aa3.58□□□□□ -1.84
CHD9-211ENST00000564600 A0A1W2PPC4 97 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 CLCA1A8K7I4 914 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 M0QZQ0 153 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 THAP12O43422 761 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 KCNQ3O43525 872 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 NCK2O43639 380 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 TLR2O60603 784 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 FGBP02675 491 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 GABRB3P28472 473 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 WDR5P61964 334 aaKnown RBP3.57□□□□□ -1.84
CHD9-211ENST00000564600 TXNL4AP83876 142 aaKnown RBP3.57□□□□□ -1.84
CHD9-211ENST00000564600 CCDC15Q0P6D6 951 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 RAPGEF1Q13905 1077 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 KCNJ12Q14500 433 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 COBLL1Q53SF7 1204 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 TMEM196Q5HYL7 178 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 MZT2AQ6P582 158 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 VSTM1Q6UX27 236 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 KRT73Q86Y46 540 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 CCDC28AQ8IWP9 274 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 SDR16C5Q8N3Y7 309 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 ZNF548Q8NEK5 533 aaPredicted RBP3.57□□□□□ -1.84
CHD9-211ENST00000564600 TTC17Q96AE7 1141 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 GDF15Q99988 308 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 SCNM1Q9BWG6 230 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 EBF3Q9H4W6 596 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 MYO1AQ9UBC5 1043 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 HEY2Q9UBP5 337 aa3.57□□□□□ -1.84
CHD9-211ENST00000564600 SIRT4Q9Y6E7 314 aaPredicted RBP3.57□□□□□ -1.84
CHD9-211ENST00000564600 FOXN3O00409 490 aaPredicted RBP3.56□□□□□ -1.84
CHD9-211ENST00000564600 PRYO14603 147 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 AREL1O15033 823 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 PMM2O15305 246 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 RNF8O76064 485 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 MYL3P08590 195 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 PECAM1P16284 738 aaPredicted RBP3.56□□□□□ -1.84
CHD9-211ENST00000564600 DRD1P21728 446 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 STT3AP46977 705 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 GPS1Q13098 491 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 C4orf46Q504U0 113 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 ARHGAP15Q53QZ3 475 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 PXDC1Q5TGL8 231 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 FAM90A2PQ658T7 463 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 HIBCHQ6NVY1 386 aaPredicted RBP3.56□□□□□ -1.84
CHD9-211ENST00000564600 HIC2Q96JB3 615 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 FCRL5Q96RD9 977 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 TMEM79Q9BSE2 394 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 SARGQ9BW04 601 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 NUAK2Q9H093 628 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 PCDHAC1Q9H158 963 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 ABHD10Q9NUJ1 306 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 ZMYND8Q9ULU4 1186 aaPredicted RBP3.56□□□□□ -1.84
CHD9-211ENST00000564600 MAN2B2Q9Y2E5 1009 aa3.56□□□□□ -1.84
CHD9-211ENST00000564600 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.56□□□□□ -1.84
CHD9-211ENST00000564600 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 SLC22A23A1A5C7 686 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 SOCS2O14508 198 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 APOL1O14791 398 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 INSIG1O15503 277 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 DHHO43323 396 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 PLAUP00749 431 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 CTSAP10619 480 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 HARSP12081 509 aaKnown RBP3.55□□□□□ -1.84
CHD9-211ENST00000564600 ALADP13716 330 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 HOXA7P31268 230 aaPredicted RBP3.55□□□□□ -1.84
CHD9-211ENST00000564600 JAK3P52333 1124 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 BFSP2Q13515 415 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 PMS2P11Q13670 270 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 FAXCQ5TGI0 409 aa3.55□□□□□ -1.84
CHD9-211ENST00000564600 PIK3AP1Q6ZUJ8 805 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms