RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 TPCN1Q9ULQ1 816 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 L1RE1Q9UN81 338 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 THRAP3Q9Y2W1 955 aaKnown RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 HS3ST3B1Q9Y662 390 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 SIRT4Q9Y6E7 314 aaPredicted RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 LRP5O75197 1615 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 AKNAQ7Z591 1439 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 ARHGEF12Q9NZN5 1544 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 MAGI2Q86UL8 1455 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 FAM90A10PA6NDY2 464 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 B4DGG1 531 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 CCP110O43303 1012 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 MAP4K4O95819 1239 aaPredicted RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 TPH1P17752 444 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 BTF3P20290 206 aaKnown RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 ACVR2AP27037 513 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 THBS3P49746 956 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 CPT1AP50416 773 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 RPS13P62277 151 aaKnown RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 FHL3Q13643 280 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 SLC9C1Q4G0N8 1177 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 MIDNQ504T8 468 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 C4orf46Q504U0 113 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 DENND2CQ68D51 928 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 PLAG1Q6DJT9 500 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 KIAA1161Q6NSJ0 714 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 ZNF549Q6P9A3 640 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 DEF8Q6ZN54 512 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 UNC13DQ70J99 1090 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 TFAP2DQ7Z6R9 452 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 ARFGAP1Q8N6T3 406 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 NMD3Q96D46 503 aaKnown RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 TRMT61AQ96FX7 289 aaKnown RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 SUCLG2Q96I99 432 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 ZFYVE19Q96K21 471 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 FAM234AQ9H0X4 552 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 SAP30LQ9HAJ7 183 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 ZBTB40Q9NUA8 1239 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 TBC1D23Q9NUY8 699 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 GAR1Q9NY12 217 aaKnown RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 DKK4Q9UBT3 224 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 AFF4Q9UHB7 1163 aaKnown RBP2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 FZD4Q9ULV1 537 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 VPS4AQ9UN37 437 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 SLC27A6Q9Y2P4 619 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 ARHGEF40Q8TER5 1519 aa2.98□□□□□ -1.93
SUB1P3-201ENST00000564581 CAMSAP1Q5T5Y3 1602 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 A0A1W2PPC1 479 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 MARCH6O60337 910 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 CNOT3O75175 753 aaKnown RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 TOMM40O96008 361 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 MBPP02686 304 aaPredicted RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 FGF2P09038 288 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 CBSLP0DN79 551 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 TXNP10599 105 aaKnown RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 TNFRSF1BP20333 461 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 ADRA1DP25100 572 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 TACR3P29371 465 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 GALNSP34059 522 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 CBSP35520 551 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 EIF4A1P60842 406 aaKnown RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 SRSF1Q07955 248 aaKnown RBP eCLIP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 TWIST1Q15672 202 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 PFKFB3Q16875 520 aaPredicted RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 ARHGAP29Q52LW3 1261 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 EARS2Q5JPH6 523 aaKnown RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 MANEALQ5VSG8 457 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 RNF220Q5VTB9 566 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 ANO7Q6IWH7 933 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 C9orf47Q6ZRZ4 202 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 PIM3Q86V86 326 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 PELI3Q8N2H9 469 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 PNPLA1Q8N8W4 532 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 FAM71DQ8N9W8 422 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 FAM156AQ8NDB6 213 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 MARK4Q96L34 752 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 BRIP1Q9BX63 1249 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 ADGRE3Q9BY15 652 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 NUAK2Q9H093 628 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 AGO4Q9HCK5 861 aaKnown RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 VPS45Q9NRW7 570 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 TYW1Q9NV66 732 aaKnown RBP2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 OGDHLQ9ULD0 1010 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 ABCA9Q8IUA7 1624 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 ALKQ9UM73 1620 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 NOTCH4Q99466 2003 aa2.97□□□□□ -1.93
SUB1P3-201ENST00000564581 PLA2R1Q13018 1463 aa2.96□□□□□ -1.93
SUB1P3-201ENST00000564581 SIGLEC1Q9BZZ2 1709 aa2.96□□□□□ -1.93
SUB1P3-201ENST00000564581 TTBK1Q5TCY1 1321 aaPredicted RBP2.96□□□□□ -1.93
SUB1P3-201ENST00000564581 FRMPD1Q5SYB0 1578 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 CEP350Q5VT06 3117 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 WRNQ14191 1432 aaPredicted RBP eCLIP2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 FHOD3Q2V2M9 1422 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 SLC22A23A1A5C7 686 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 C2CD4BA6NLJ0 364 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 A8MVJ9 347 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 ISM1B1AKI9 464 aa2.96□□□□□ -1.94
SUB1P3-201ENST00000564581 FAM227AF5H4B4 570 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms