RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ZNF217O75362 1048 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 PTGER3P43115 390 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 DHPSP49366 369 aaPredicted RBP17.55■□□□□ 0.4
CCNF-203ENST00000564236 BCAT1P54687 386 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 SLC8A3P57103 927 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 IRX4P78413 519 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 NUCB2P80303 420 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 LMAN2Q12907 356 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 PKDCCQ504Y2 493 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 DAB2IPQ5VWQ8 1189 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 SLC23A3Q6PIS1 610 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 CHPFQ8IZ52 775 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 FRMD1Q8N878 549 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 IPO4Q8TEX9 1081 aaKnown RBP17.55■□□□□ 0.4
CCNF-203ENST00000564236 ACOX2Q99424 681 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 TMEM9BQ9NQ34 198 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 CALCOCO1Q9P1Z2 691 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
CCNF-203ENST00000564236 PILRBQ9UKJ0 227 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 KIAA1257Q9ULG3 409 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 TPRP12270 2363 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 MYOFQ9NZM1 2061 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 PATE3B3GLJ2 98 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 AP5Z1O43299 807 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 ZBED1O96006 694 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 C7P10643 843 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 CSRP1P21291 193 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 TBXAS1P24557 533 aaPredicted RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 CORO1AP31146 461 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 PPP1R2P41236 205 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 MFAP3P55082 362 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 YWHAGP61981 247 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCNF-203ENST00000564236 YWHAEP62258 255 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 BST2Q10589 180 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 TRIP4Q15650 581 aaPredicted RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 DCAF17Q5H9S7 520 aaPredicted RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 TCERG1LQ5VWI1 586 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 LYSMD4Q5XG99 296 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 SDE2Q6IQ49 451 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 METTL3Q86U44 580 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 TMEFF1Q8IYR6 380 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 KCTD13Q8WZ19 329 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 PIGKQ92643 395 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 SMARCE1Q969G3 411 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 CEP63Q96MT8 703 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 METTL14Q9HCE5 456 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 TMEM74BQ9NUR3 256 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 HOOK1Q9UJC3 728 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 STOML2Q9UJZ1 356 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 TSPAN16Q9UKR8 245 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 ANGPTL2Q9UKU9 493 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 AGO1Q9UL18 857 aaKnown RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 STRIP2Q9ULQ0 834 aa17.54■□□□□ 0.4
CCNF-203ENST00000564236 KMT2BQ9UMN6 2715 aaPredicted RBP17.54■□□□□ 0.4
CCNF-203ENST00000564236 CNOT1A5YKK6 2376 aaKnown RBP17.53■□□□□ 0.4
CCNF-203ENST00000564236 ABCA7Q8IZY2 2146 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 IGHV1OR15-9A0A0B4J2B8 117 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 GOLGA6L4A6NEF3 574 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 O00370 1275 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 MAP3K13O43283 966 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 NDUFV2P19404 249 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 TKTL1P51854 596 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 PDE4CQ08493 712 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 EFEMP1Q12805 493 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 TRIM61Q5EBN2 209 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 KIAA1211LQ6NV74 962 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 RBBP8NLQ8NC74 664 aaPredicted RBP17.53■□□□□ 0.4
CCNF-203ENST00000564236 PLD4Q96BZ4 506 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 DHTKD1Q96HY7 919 aaPredicted RBP17.53■□□□□ 0.4
CCNF-203ENST00000564236 PIWIL1Q96J94 861 aaKnown RBP17.53■□□□□ 0.4
CCNF-203ENST00000564236 SLC2A11Q9BYW1 496 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
CCNF-203ENST00000564236 MARCH2Q9P0N8 246 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 RASAL2Q9UJF2 1139 aa17.53■□□□□ 0.4
CCNF-203ENST00000564236 TNRC6BQ9UPQ9 1833 aaKnown RBP17.52■□□□□ 0.4
CCNF-203ENST00000564236 TRIM49BA6NDI0 452 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 TULP2O00295 520 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 P4HA2O15460 535 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 LATS1O95835 1130 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 PAEPP09466 180 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 SETSIPP0DME0 302 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 VDRP11473 427 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 EIF4HQ15056 248 aaKnown RBP17.52■□□□□ 0.4
CCNF-203ENST00000564236 E2F5Q15329 346 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 GOLGA7BQ2TAP0 167 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 RABEPKQ7Z6M1 372 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 PGBD3Q8N328 593 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 CEP76Q8TAP6 659 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 MRGPRX1Q96LB2 322 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 NUSAP1Q9BXS6 441 aaKnown RBP17.52■□□□□ 0.4
CCNF-203ENST00000564236 ULBP1Q9BZM6 244 aa17.52■□□□□ 0.4
CCNF-203ENST00000564236 THAP10Q9P2Z0 257 aaPredicted RBP17.52■□□□□ 0.4
CCNF-203ENST00000564236 HBS1LQ9Y450 684 aaKnown RBP17.52■□□□□ 0.4
CCNF-203ENST00000564236 ZFHX4Q86UP3 3567 aa17.52■□□□□ 0.39
CCNF-203ENST00000564236 UPK3BL1B0FP48 263 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 UPK3BL2E5RIL1 263 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 PSMA7O14818 248 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms