RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CCDC130P13994 396 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 GJA1P17302 382 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 PSMA2P25787 234 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 ADORA2BP29275 332 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 SSR1P43307 286 aaKnown RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 COPS2P61201 443 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 RPL7AP62424 266 aaKnown RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 SLC6A3Q01959 620 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 YWHAHQ04917 246 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 PDE4CQ08493 712 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 C2orf54Q08AI8 447 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 BRD3Q15059 726 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 EFHC1Q5JVL4 640 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 OVOS1Q6IE37 1185 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 OR6B2Q6IFH4 312 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 RNF19BQ6ZMZ0 732 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 C4orf50Q6ZRC1 276 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 SLC26A9Q7LBE3 791 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 MAATS1Q7Z4T9 603 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 OSTM1Q86WC4 334 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 FUKQ8N0W3 1084 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 NOA1Q8NC60 698 aaKnown RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 CCDC26Q8TAB7 109 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 MYCBPAPQ8TBZ2 947 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 ALG3Q92685 438 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 ATOH1Q92858 354 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 RSPRY1Q96DX4 576 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 SMARCD1Q96GM5 515 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 MS4A14Q96JA4 679 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 BTBD6Q96KE9 485 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 ZSWIM3Q96MP5 696 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 CNPY3Q9BT09 278 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 MED10Q9BTT4 135 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 TRIM62Q9BVG3 475 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 UBXN6Q9BZV1 441 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 TBC1D17Q9HA65 648 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 PNPLA8Q9NP80 782 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 METTL5Q9NRN9 209 aaKnown RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 HOMER3Q9NSC5 361 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 CHORDC1Q9UHD1 332 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 TMEM59LQ9UK28 342 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 CDH7Q9ULB5 785 aa10.18□□□□□ -0.78
UBFD1-203ENST00000564106 EP300Q09472 2414 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-203ENST00000564106 DPYSL4O14531 572 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 SOAT2O75908 522 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 ZRANB2O95218 330 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 GLI1P08151 1106 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 HNRNPA1P09651 372 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 SRFP11831 508 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 GPD1P21695 349 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CD72P21854 359 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 HOXA9P31269 272 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 SDC4P31431 198 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 RFC1P35251 1148 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 PCK1P35558 622 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CLCN5P51795 746 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 ZNF143P52747 638 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CREMQ03060 361 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CCDC142Q17RM4 750 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 PABPC1LQ4VXU2 614 aaKnown RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 MDH1BQ5I0G3 518 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 DCAF12L1Q5VU92 463 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 TANGO2Q6ICL3 276 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 PMF1Q6P1K2 205 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 OLFML1Q6UWY5 402 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 FAM183BPQ6ZVS7 135 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 FAM35AQ86V20 835 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CCDC50Q8IVM0 306 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 CCDC105Q8IYK2 499 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 RCOR2Q8IZ40 523 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 SIX6OS1Q8N1H7 587 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 HNRNPLLQ8WVV9 542 aaKnown RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 KRT35Q92764 455 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 PGLYRP2Q96PD5 576 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 RTP3Q9BQQ7 232 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 MFSD1Q9H3U5 465 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 LRRC4Q9HBW1 653 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 KRT82Q9NSB4 513 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 RBM12Q9NTZ6 932 aaKnown RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 STIM2Q9P246 746 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 FBXL21Q9UKT6 434 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 RAB21Q9UL25 225 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 NME7Q9Y5B8 376 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 PTPRZ1P23471 2315 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-203ENST00000564106 DMXL1Q9Y485 3027 aa10.17□□□□□ -0.78
UBFD1-203ENST00000564106 OTOGLQ3ZCN5 2332 aa10.16□□□□□ -0.78
UBFD1-203ENST00000564106 PRR23AA6NEV1 266 aa10.16□□□□□ -0.78
UBFD1-203ENST00000564106 C2CD4BA6NLJ0 364 aa10.16□□□□□ -0.78
UBFD1-203ENST00000564106 GFRA3O60609 400 aa10.16□□□□□ -0.78
UBFD1-203ENST00000564106 HSF2BPO75031 334 aa10.16□□□□□ -0.78
UBFD1-203ENST00000564106 POU2F2P09086 479 aa10.16□□□□□ -0.78
UBFD1-203ENST00000564106 RHOXF2BP0C7M4 288 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms