RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CALCAP01258 141 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 KLKB1P03952 638 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 ZNF806P0C7X5 589 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 LCP1P13796 627 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 DHPSP49366 369 aaPredicted RBP18.53■□□□□ 0.56
NME3-205ENST00000563854 DNAH14Q0VDD8 3507 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 CAMK4Q16566 473 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 RRAGAQ7L523 313 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 DENND1CQ8IV53 801 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 UBR7Q8N806 425 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 DCLK3Q9C098 648 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 VPS45Q9NRW7 570 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 RXFP3Q9NSD7 469 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 SDK1Q7Z5N4 2213 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 M0QYV0 167 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 SLC30A4O14863 429 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 MAP3K13O43283 966 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 SETSIPP0DME0 302 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 BRD2P25440 801 aaKnown RBP18.52■□□□□ 0.56
NME3-205ENST00000563854 RGS7P49802 495 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 PMS2CLQ68D20 193 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 IL31Q6EBC2 164 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 ARMCX6Q7L4S7 300 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 C11orf74Q86VG3 221 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 CREBRFQ8IUR6 639 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 ARHGEF19Q8IW93 802 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 CHPFQ8IZ52 775 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 ZNF276Q8N554 614 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 RBBP8NLQ8NC74 664 aaPredicted RBP18.52■□□□□ 0.56
NME3-205ENST00000563854 RNF139Q8WU17 664 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 EDEM1Q92611 657 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 ACOX2Q99424 681 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 SRRTQ9BXP5 876 aaKnown RBP18.52■□□□□ 0.56
NME3-205ENST00000563854 AGO1Q9UL18 857 aaKnown RBP18.52■□□□□ 0.56
NME3-205ENST00000563854 ZNF510Q9Y2H8 683 aa18.52■□□□□ 0.56
NME3-205ENST00000563854 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.52■□□□□ 0.56
NME3-205ENST00000563854 PRRT4C9JH25 899 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 CAVIN2O95810 425 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 PAEPP09466 180 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 NTSR1P30989 418 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 KCNH2Q12809 1159 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 PLA2G2CQ5R387 149 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 PM20D1Q6GTS8 502 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 SDE2Q6IQ49 451 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 BHLHA9Q7RTU4 235 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 CYP2U1Q7Z449 544 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 FRMD1Q8N878 549 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 HCN2Q9UL51 889 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 KIAA1257Q9ULG3 409 aa18.51■□□□□ 0.55
NME3-205ENST00000563854 BCLAF3A2AJT9 711 aaKnown RBP18.5■□□□□ 0.55
NME3-205ENST00000563854 YJEFN3A6XGL0 299 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 E7ENQ6 273 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 RNF225M0QZC1 329 aaPredicted RBP18.5■□□□□ 0.55
NME3-205ENST00000563854 GNA14O95837 355 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 AFPP02771 609 aaKnown RBP18.5■□□□□ 0.55
NME3-205ENST00000563854 CYBBP04839 570 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 CHKAP35790 457 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 P2RY2P41231 377 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 BSPRYQ5W0U4 402 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 LCLAT1Q6UWP7 414 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 FMNL3Q8IVF7 1028 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 TRIM59Q8IWR1 403 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 OLIG1Q8TAK6 271 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 KCNV2Q8TDN2 545 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 P2RY11Q96G91 374 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 INTS2Q9H0H0 1204 aaKnown RBP18.5■□□□□ 0.55
NME3-205ENST00000563854 OLA1Q9NTK5 396 aaKnown RBP18.5■□□□□ 0.55
NME3-205ENST00000563854 CACNA2D2Q9NY47 1150 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 SFMBT1Q9UHJ3 866 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.5■□□□□ 0.55
NME3-205ENST00000563854 RAD54BQ9Y620 910 aa18.5■□□□□ 0.55
NME3-205ENST00000563854 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 PMM2O15305 246 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 P4HA2O15460 535 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
NME3-205ENST00000563854 KRT5P13647 590 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 GABRG2P18507 467 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 UBE2HP62256 183 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 PPM1JQ5JR12 505 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 FYB2Q5VWT5 728 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 LPCAT2Q7L5N7 544 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 TMEFF1Q8IYR6 380 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 EHBP1Q8NDI1 1231 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 LMO3Q8TAP4 145 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 DDI1Q8WTU0 396 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 PIGKQ92643 395 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 PLD4Q96BZ4 506 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 ZSWIM1Q9BR11 485 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 EDEM2Q9BV94 578 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 CALCOCO1Q9P1Z2 691 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 STARD13Q9Y3M8 1113 aa18.49■□□□□ 0.55
NME3-205ENST00000563854 MSI1O43347 362 aaKnown RBP18.48■□□□□ 0.55
NME3-205ENST00000563854 TSPAN3O60637 253 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 FGFR1OPO95684 399 aaKnown RBP18.48■□□□□ 0.55
NME3-205ENST00000563854 PENKP01210 267 aaPredicted RBP18.48■□□□□ 0.55
NME3-205ENST00000563854 CISD3P0C7P0 127 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 HARS2P49590 506 aaKnown RBP18.48■□□□□ 0.55
NME3-205ENST00000563854 DAOAP59103 153 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 PKDCCQ504Y2 493 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms